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The map label for this gene is ycaK [H]

Identifier: 157371416

GI number: 157371416

Start: 3498329

End: 3498940

Strand: Reverse

Name: ycaK [H]

Synonym: Spro_3177

Alternate gene names: 157371416

Gene position: 3498940-3498329 (Counterclockwise)

Preceding gene: 157371420

Following gene: 157371410

Centisome position: 64.21

GC content: 51.14

Gene sequence:

>612_bases
ATGAAATTAAATAATATTTACTTTATCTGGGCCCATCCGCGTCCCGATTCTTTAACCACGCAGGTGGTGGGTGAGATGCA
GAGCGAAGCGGCGCGTCAGGGCTACAATGTTTCCAGCCTTGATCTCTACCGCAGCCATTTTGATCCGATACTCAGGGTGG
AAGATGAGCCGGACTGGGATAATCCGCAGAAAACCTATTCTGAAGAAGTGCATCGGCTTTTCAATGAGCTGGAGGATAAG
GACACACTGGTTCTGGTGTTCCCCGTATGGTGGTATGCCTTTCCGGCAATGCTTAAGGGTTATCTGGAACGCGTCTGGAA
CTATGGTCTGGCCTACGGCGTAGGGAGTGGCCTGAAGGATAAAAAGATCCGCTGGCTGGCTTTGGTGGGCGGTTCACAGT
CAGGATTCATTAAGTACGGCTGGGAAAAGAACATGACCGATTACATTAATGGCAGCATGGCCTATCTGGGTGTGGAGGAT
GCAAGGATCGATTTTCTCTATAATACGATTGGCGTGGAGGAGGGGATCACCGACGGCGAGGCCCACTACCAAAAACTGTT
CGCCGAAGCGCGTGAGGTTGTCAGTTCTCTGAGAGCAACCAGTGAAGCCTGA

Upstream 100 bases:

>100_bases
AGTGAATTTTACTCAATAACCCATCTCAAATACTACGTTTTACACAACTATCCTGCGGCCGTAAAGTAATAGTTCTTTCA
CGGATAATTAGGGTAATTAT

Downstream 100 bases:

>100_bases
GCACTAGCGCCTGGCTAAAATACCAAAAGCAGACTTCCGGAGAAGCCTGCTTTTCTAATTTGGCGGGGTTATTTAGCGGA
GAGTTCTCTGCGGATGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKLNNIYFIWAHPRPDSLTTQVVGEMQSEAARQGYNVSSLDLYRSHFDPILRVEDEPDWDNPQKTYSEEVHRLFNELEDK
DTLVLVFPVWWYAFPAMLKGYLERVWNYGLAYGVGSGLKDKKIRWLALVGGSQSGFIKYGWEKNMTDYINGSMAYLGVED
ARIDFLYNTIGVEEGITDGEAHYQKLFAEAREVVSSLRATSEA

Sequences:

>Translated_203_residues
MKLNNIYFIWAHPRPDSLTTQVVGEMQSEAARQGYNVSSLDLYRSHFDPILRVEDEPDWDNPQKTYSEEVHRLFNELEDK
DTLVLVFPVWWYAFPAMLKGYLERVWNYGLAYGVGSGLKDKKIRWLALVGGSQSGFIKYGWEKNMTDYINGSMAYLGVED
ARIDFLYNTIGVEEGITDGEAHYQKLFAEAREVVSSLRATSEA
>Mature_203_residues
MKLNNIYFIWAHPRPDSLTTQVVGEMQSEAARQGYNVSSLDLYRSHFDPILRVEDEPDWDNPQKTYSEEVHRLFNELEDK
DTLVLVFPVWWYAFPAMLKGYLERVWNYGLAYGVGSGLKDKKIRWLALVGGSQSGFIKYGWEKNMTDYINGSMAYLGVED
ARIDFLYNTIGVEEGITDGEAHYQKLFAEAREVVSSLRATSEA

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Escherichia coli, GI1787129, Length=201, Percent_Identity=50.2487562189055, Blast_Score=220, Evalue=5e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 23339; Mature: 23339

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNNIYFIWAHPRPDSLTTQVVGEMQSEAARQGYNVSSLDLYRSHFDPILRVEDEPDWD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCC
NPQKTYSEEVHRLFNELEDKDTLVLVFPVWWYAFPAMLKGYLERVWNYGLAYGVGSGLKD
CHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KKIRWLALVGGSQSGFIKYGWEKNMTDYINGSMAYLGVEDARIDFLYNTIGVEEGITDGE
CCEEEEEEECCCCCCCEEECCCCCCHHHHCCCEEEEECCHHHHHHHHHHHCHHCCCCCCH
AHYQKLFAEAREVVSSLRATSEA
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLNNIYFIWAHPRPDSLTTQVVGEMQSEAARQGYNVSSLDLYRSHFDPILRVEDEPDWD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCC
NPQKTYSEEVHRLFNELEDKDTLVLVFPVWWYAFPAMLKGYLERVWNYGLAYGVGSGLKD
CHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KKIRWLALVGGSQSGFIKYGWEKNMTDYINGSMAYLGVEDARIDFLYNTIGVEEGITDGE
CCEEEEEEECCCCCCCEEECCCCCCHHHHCCCEEEEECCHHHHHHHHHHHCHHCCCCCCH
AHYQKLFAEAREVVSSLRATSEA
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3053170; 7567469 [H]