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The map label for this gene is ytnA [H]

Identifier: 157371326

GI number: 157371326

Start: 3396929

End: 3398329

Strand: Reverse

Name: ytnA [H]

Synonym: Spro_3087

Alternate gene names: 157371326

Gene position: 3398329-3396929 (Counterclockwise)

Preceding gene: 157371327

Following gene: 157371325

Centisome position: 62.37

GC content: 56.39

Gene sequence:

>1401_bases
ATGAAACAGATGAAAGGTTTTGAAGAAATTGCGCGGCGGCAGGGCGGGTTGAAGAAACAGCTCACCGCCGGGCAGATGAC
CATGCTGGCGATAGGTGGGGCGATCGGCACCGGGCTGTTTCTTGGCAGTGCCTATGCCATTCAGATGGCCGGCCCCAGCG
TCCTGTTGAGCTATTTTATCGGCGGCGTGGTGGCGTTGTTGCTGATGGGATGCCTGGCGGAAATGACCTCTGAACATCCG
ACGCCGGGCTCTTTTGGTGACTACGCCGAGTTTTACATCAGTCCGCTGTTCGGTTTTCTGGTGCGTTATTCCTACTGGTC
CTGCGTAGTGTTGGCGGTGGGCACCGAGGTTACCGCCATCGGTATGTATATGCAGTTCTGGTTCCCGACTACGCCGATTT
GGCCCTGGGTGCTGCTGTTTTCTGCGGCAGTCATCGTCATCAATGTGATTGGCGTCAAGTCCTTCGGCCAGGTGGAGTAT
GCGCTGTCGACCATCAAGGTGGTGGCCATCGCGGCCTTTATCGCCATTGGCATCGGCATTTTGGTGTTTTCCGCTAACCC
GGCCTACGGTATTCACAACTTTACCGCCAATGGCGGCTTCTTCCCGTTTGGCGTCAAGGGCATGTGGTTTGCGGTGATCG
TGTCGATTTTCAGCTACCTGAGCATTGAGATGATCGCAGTGGCCGCCGGTGAAGCCAAAAACCCGGTGATTGCGGTGAAA
ACTGCCTTCAAGGGTACCATCTTGCGGCTGTTTATTTTTTATATGCTGTCGATTGCGCTGATGCTGGCGATCGTTCCCTG
GCGGCAGTCCGGCACCGGTGAAAGCCCGTTCCTGATGGCGATGAACGTGATCCACCTGCCTGCCGCCGCCGGTATCTTCA
ACTTTATCGTGCTGGTGGCCGCGCTGTCGGCGATGAACAGCCAGTTGTATATCACCACCCGCATGATGTTCTCACTGTCG
CGTGCCGGTCAGGCACCGGCGGCGCTGGGCCGGGTCAGCAAACGCGGCATTCCGGTGAACGCGCTGGCGATGTCCTGCAT
TGGCATTGTAGTGTCGATCGTGCTGAGCCTGGTTTATCCGGAGAAATCCTTTGCCGCCATGATGTCTATTTCGGTGTACG
GCGCTTGCTTTACCTGGCTGATGATTTTTGTCACTCACCTGTTTTTCCGTCGCCAGCATCGCCAAACTCACCTGAAATTT
CGCATGTGGGGCTTCCCCTATACCACGCTGGCCGGTGCCGGTTTGATGACCGCACTGTTGATCTCGACGGCGTTCACCGA
GTTTTTCAAGATGACGCTGTGGTTCGGCATCCCGTTCACTCTGCTGCTGGTGGCGATCTATTTCTTCTATAGCCGCCATC
AGCCGCTGCCCACCGCGATGGAAACGCCGGAGTTAGAGTAA

Upstream 100 bases:

>100_bases
GGCCGCATGTGTTTGCCCGGCCTGAATCAAAACAATGTCGACTACGTGACTGCCGCCATCCTGGATGTCACCCGTACTGT
GTGAATAAGGTAGGACCGCC

Downstream 100 bases:

>100_bases
AGTGGTTTGCTGATAATGTCGTTATCTGGCTCTGGCAATAAACCACTTTAACCGGAGAATAAGGGATCTTTCGCAGGTGT
AGAGTGGTGTTGCCATGAGC

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKQMKGFEEIARRQGGLKKQLTAGQMTMLAIGGAIGTGLFLGSAYAIQMAGPSVLLSYFIGGVVALLLMGCLAEMTSEHP
TPGSFGDYAEFYISPLFGFLVRYSYWSCVVLAVGTEVTAIGMYMQFWFPTTPIWPWVLLFSAAVIVINVIGVKSFGQVEY
ALSTIKVVAIAAFIAIGIGILVFSANPAYGIHNFTANGGFFPFGVKGMWFAVIVSIFSYLSIEMIAVAAGEAKNPVIAVK
TAFKGTILRLFIFYMLSIALMLAIVPWRQSGTGESPFLMAMNVIHLPAAAGIFNFIVLVAALSAMNSQLYITTRMMFSLS
RAGQAPAALGRVSKRGIPVNALAMSCIGIVVSIVLSLVYPEKSFAAMMSISVYGACFTWLMIFVTHLFFRRQHRQTHLKF
RMWGFPYTTLAGAGLMTALLISTAFTEFFKMTLWFGIPFTLLLVAIYFFYSRHQPLPTAMETPELE

Sequences:

>Translated_466_residues
MKQMKGFEEIARRQGGLKKQLTAGQMTMLAIGGAIGTGLFLGSAYAIQMAGPSVLLSYFIGGVVALLLMGCLAEMTSEHP
TPGSFGDYAEFYISPLFGFLVRYSYWSCVVLAVGTEVTAIGMYMQFWFPTTPIWPWVLLFSAAVIVINVIGVKSFGQVEY
ALSTIKVVAIAAFIAIGIGILVFSANPAYGIHNFTANGGFFPFGVKGMWFAVIVSIFSYLSIEMIAVAAGEAKNPVIAVK
TAFKGTILRLFIFYMLSIALMLAIVPWRQSGTGESPFLMAMNVIHLPAAAGIFNFIVLVAALSAMNSQLYITTRMMFSLS
RAGQAPAALGRVSKRGIPVNALAMSCIGIVVSIVLSLVYPEKSFAAMMSISVYGACFTWLMIFVTHLFFRRQHRQTHLKF
RMWGFPYTTLAGAGLMTALLISTAFTEFFKMTLWFGIPFTLLLVAIYFFYSRHQPLPTAMETPELE
>Mature_466_residues
MKQMKGFEEIARRQGGLKKQLTAGQMTMLAIGGAIGTGLFLGSAYAIQMAGPSVLLSYFIGGVVALLLMGCLAEMTSEHP
TPGSFGDYAEFYISPLFGFLVRYSYWSCVVLAVGTEVTAIGMYMQFWFPTTPIWPWVLLFSAAVIVINVIGVKSFGQVEY
ALSTIKVVAIAAFIAIGIGILVFSANPAYGIHNFTANGGFFPFGVKGMWFAVIVSIFSYLSIEMIAVAAGEAKNPVIAVK
TAFKGTILRLFIFYMLSIALMLAIVPWRQSGTGESPFLMAMNVIHLPAAAGIFNFIVLVAALSAMNSQLYITTRMMFSLS
RAGQAPAALGRVSKRGIPVNALAMSCIGIVVSIVLSLVYPEKSFAAMMSISVYGACFTWLMIFVTHLFFRRQHRQTHLKF
RMWGFPYTTLAGAGLMTALLISTAFTEFFKMTLWFGIPFTLLLVAIYFFYSRHQPLPTAMETPELE

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI110347453, Length=351, Percent_Identity=25.3561253561254, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI87081708, Length=468, Percent_Identity=36.3247863247863, Blast_Score=292, Evalue=4e-80,
Organism=Escherichia coli, GI48994972, Length=455, Percent_Identity=38.021978021978, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI1786789, Length=425, Percent_Identity=38.3529411764706, Blast_Score=281, Evalue=4e-77,
Organism=Escherichia coli, GI1786302, Length=387, Percent_Identity=37.984496124031, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1786602, Length=450, Percent_Identity=34.4444444444444, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1790653, Length=398, Percent_Identity=31.9095477386935, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI87081915, Length=406, Percent_Identity=32.2660098522167, Blast_Score=226, Evalue=3e-60,
Organism=Escherichia coli, GI1789017, Length=416, Percent_Identity=32.6923076923077, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1788480, Length=449, Percent_Identity=30.7349665924276, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI2367353, Length=359, Percent_Identity=25.9052924791086, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17532491, Length=365, Percent_Identity=23.5616438356164, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324061, Length=472, Percent_Identity=27.5423728813559, Blast_Score=180, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6320772, Length=477, Percent_Identity=28.3018867924528, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6324990, Length=415, Percent_Identity=29.6385542168675, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6324553, Length=422, Percent_Identity=29.1469194312796, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6321629, Length=433, Percent_Identity=27.7136258660508, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6320251, Length=396, Percent_Identity=27.020202020202, Blast_Score=156, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6321053, Length=410, Percent_Identity=27.8048780487805, Blast_Score=156, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6319542, Length=421, Percent_Identity=27.3159144893112, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6324924, Length=424, Percent_Identity=26.6509433962264, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6324059, Length=453, Percent_Identity=27.5938189845475, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6322892, Length=395, Percent_Identity=28.3544303797468, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320717, Length=407, Percent_Identity=27.2727272727273, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6319824, Length=401, Percent_Identity=27.930174563591, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6319608, Length=456, Percent_Identity=24.1228070175439, Blast_Score=132, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6322967, Length=341, Percent_Identity=27.8592375366569, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6319543, Length=405, Percent_Identity=24.4444444444444, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324981, Length=387, Percent_Identity=27.1317829457364, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6320364, Length=479, Percent_Identity=23.1732776617954, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24667468, Length=420, Percent_Identity=22.6190476190476, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221512776, Length=429, Percent_Identity=23.3100233100233, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24666159, Length=429, Percent_Identity=23.3100233100233, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50955; Mature: 50955

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]