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The map label for this gene is ydeK [H]

Identifier: 157371325

GI number: 157371325

Start: 3395932

End: 3396834

Strand: Reverse

Name: ydeK [H]

Synonym: Spro_3086

Alternate gene names: 157371325

Gene position: 3396834-3395932 (Counterclockwise)

Preceding gene: 157371326

Following gene: 157371311

Centisome position: 62.34

GC content: 61.13

Gene sequence:

>903_bases
ATGAGCAGTGAGACAGAAAAAATTCAGATTGTCGGCCGAAGCGATAATTCGGCCCAGGGCTGGGTTAGTGGCTTTCTGGG
GATGTTGATTTTTAGCGGTTCTTTGCCCGCCACCCGCCTGGCGGTGCAAGAGTTTGATCCCCTTTTCCTGACCGCGTTGC
GGGCGGTGCTGGCAGCCATATTGGCGCTGAGTGCGCTGGGGGTCATGCGTCAACGTTGGCCGCAGCGTCAGGACTTGGTG
CCGCTGGTGATGGTTGCGATCGGGGTAGTGATCGGTTTCCCGTTGCTGACGGCATTGGCCTTGCAGCACACCACCTCGGC
GCATGCGCTGGTGTATATCGGGCTATTGCCGCTGGCGACCGCCTGTTTTGGCGTACTGCGCGGGGGAGAACGCCCGAAAA
CCGCTTTCTGGCTGTTCTCGGTGTTGGGTAGCCTGTTGGTGGGGGCCTTTGCGCTAAGCCAGGGGGCGGGCGCTTCCTGG
GTCGGTGACCTGCTGATGGTGGCTGCGGTATTGCTCTGCGGCCTGGGCTACGCGGAGGGCGCGATGCTGACGCGCAGGCT
TGGTGGCTGGCAGGTGATTTCCTGGGCGCTGGTGGTGGCTTTGCCGCTGACGGCAGGGGTTGCCGTTTGGGCCGCACCAG
CGAGTTGGCCGCAGGTCAGCGTCGGTGCGTGGTTTTCTCTGGGCTATATTTCGCTGTTTAGCATGTGGATTGGTTTTATC
TTCTGGTATCGCGGTTTGGCGCTGGGCGGCATTGCCGCCGTGGGGCAGTTACAACTACTGCAGCCGTTCTTTGGTCTGGC
GCTGGCCGCATGGGTGCTGCATGAAAGCATCCAGCCTTCGATGATTGCGGTCATGGCCGGGGTATTGGTTTGCGTGTACG
GCGCGAAGCGATTTTCGCGCTGA

Upstream 100 bases:

>100_bases
GAGTAAAGTGGTTTGCTGATAATGTCGTTATCTGGCTCTGGCAATAAACCACTTTAACCGGAGAATAAGGGATCTTTCGC
AGGTGTAGAGTGGTGTTGCC

Downstream 100 bases:

>100_bases
ATCGGGCATATGATATTGCTCAAGTGAGCGCCCCTCTCCCGGGGGAGAGGGGATTAGCCGGTGTTAGCCAGGGCCACCAG
CACCTGATTCAGCCGTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSSETEKIQIVGRSDNSAQGWVSGFLGMLIFSGSLPATRLAVQEFDPLFLTALRAVLAAILALSALGVMRQRWPQRQDLV
PLVMVAIGVVIGFPLLTALALQHTTSAHALVYIGLLPLATACFGVLRGGERPKTAFWLFSVLGSLLVGAFALSQGAGASW
VGDLLMVAAVLLCGLGYAEGAMLTRRLGGWQVISWALVVALPLTAGVAVWAAPASWPQVSVGAWFSLGYISLFSMWIGFI
FWYRGLALGGIAAVGQLQLLQPFFGLALAAWVLHESIQPSMIAVMAGVLVCVYGAKRFSR

Sequences:

>Translated_300_residues
MSSETEKIQIVGRSDNSAQGWVSGFLGMLIFSGSLPATRLAVQEFDPLFLTALRAVLAAILALSALGVMRQRWPQRQDLV
PLVMVAIGVVIGFPLLTALALQHTTSAHALVYIGLLPLATACFGVLRGGERPKTAFWLFSVLGSLLVGAFALSQGAGASW
VGDLLMVAAVLLCGLGYAEGAMLTRRLGGWQVISWALVVALPLTAGVAVWAAPASWPQVSVGAWFSLGYISLFSMWIGFI
FWYRGLALGGIAAVGQLQLLQPFFGLALAAWVLHESIQPSMIAVMAGVLVCVYGAKRFSR
>Mature_299_residues
SSETEKIQIVGRSDNSAQGWVSGFLGMLIFSGSLPATRLAVQEFDPLFLTALRAVLAAILALSALGVMRQRWPQRQDLVP
LVMVAIGVVIGFPLLTALALQHTTSAHALVYIGLLPLATACFGVLRGGERPKTAFWLFSVLGSLLVGAFALSQGAGASWV
GDLLMVAAVLLCGLGYAEGAMLTRRLGGWQVISWALVVALPLTAGVAVWAAPASWPQVSVGAWFSLGYISLFSMWIGFIF
WYRGLALGGIAAVGQLQLLQPFFGLALAAWVLHESIQPSMIAVMAGVLVCVYGAKRFSR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31833; Mature: 31702

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSETEKIQIVGRSDNSAQGWVSGFLGMLIFSGSLPATRLAVQEFDPLFLTALRAVLAAI
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
LALSALGVMRQRWPQRQDLVPLVMVAIGVVIGFPLLTALALQHTTSAHALVYIGLLPLAT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ACFGVLRGGERPKTAFWLFSVLGSLLVGAFALSQGAGASWVGDLLMVAAVLLCGLGYAEG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
AMLTRRLGGWQVISWALVVALPLTAGVAVWAAPASWPQVSVGAWFSLGYISLFSMWIGFI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FWYRGLALGGIAAVGQLQLLQPFFGLALAAWVLHESIQPSMIAVMAGVLVCVYGAKRFSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSETEKIQIVGRSDNSAQGWVSGFLGMLIFSGSLPATRLAVQEFDPLFLTALRAVLAAI
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHH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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]