Click here to switch to the map view.

The map label for this gene is cmoB

Identifier: 157371027

GI number: 157371027

Start: 3065554

End: 3066525

Strand: Direct

Name: cmoB

Synonym: Spro_2787

Alternate gene names: 157371027

Gene position: 3065554-3066525 (Clockwise)

Preceding gene: 157371026

Following gene: 157371029

Centisome position: 56.26

GC content: 57.51

Gene sequence:

>972_bases
ATGATTGAGTTTGGTGATTTTTATCAACGCATCGCAAAAGGCAACCTCAGCCATTGGCTCGATACGCTGCCCGCGCAGCT
TAGCGCCTGGCAGCGTGAGTCGCTGCACGGCAAGTTCAAACAGTGGTTTAATTCGGTTGAACACCTGCCGGCACTGACGC
CGACCCGTCTGGATTTGCTGAACGGCGTGCGTGCCGAGATGGACACCCCTCTGTCACCAGGCCAGTTGGAAGGCATCGAA
AAAATGCTGCGCACCATGATGCCGTGGCGTAAAGGGCCGTTCTCGCTGTATGGCATCGATATCGATACCGAATGGCATTC
CGACTGGAAATGGGATCGCGTTTTACCGCACATTTCACCGCTGGCCGGTCGCACCATTCTTGATGTCGGCTGCGGCAGCG
GTTATCACCTGTGGCGCATGCTTGGCGCTGGCGCACAGTTGGCGGTCGGCATCGACCCGATGCAACTGTTCCTGTGTCAG
TTCGAAGCGGTGCGTAAACTGCTGGGCGGCGATCAGCGCGCTCACCTGCTACCGCTCGGCATTGAGCAACTGCCGGAACT
GGCCGCCTTCGACACGGTATTTTCGATGGGTGTGTTGTATCACCGCCGCTCGCCGCTGGATCACCTCTACCAGTTGAAAA
ACCAATTGGTCAGCGAAGGTGAACTGGTGTTGGAAACGCTGGTAATCGAAGGCGACCGCAATCAGGTATTGGTGCCCGGC
GATCGCTATGCGCAAATGCGTAACGTCTATTTTATTCCGTCTGCCGAAGCGCTGAAGTGCTGGCTGGAGAAGTGCGGTTT
CGTCGACGTGAAAATCGCCGACATGTGCGTGACCAGCACCGAAGAACAACGCCGCACCGACTGGATGACCAGCGAGTCAC
TGGCCGAGTTCCTCGATCCTAACGATCCGGGCAAAACCATCGAAGGTTACCCCTCCCCGCTGCGCGCCGTGCTGGTGGCC
CGGAAACCTTAA

Upstream 100 bases:

>100_bases
ACAAGACGCGTTTGAAGCAGGCCGGTTTTGAACACGCTGAAGTCTGGTTCCAGTGCTTTAACTTCGGTTCACTGATCGCC
CTGAAATCGGGGGCGGCAGC

Downstream 100 bases:

>100_bases
GGCCCAAAACATCATCCCCGCTGGATTTACATTCAACGGGGATGATGTTGTCAGTCGGTAAATGCTTTGGCCACGTGCTT
TAGGCACTTTGCACCAGCGG

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIEFGDFYQRIAKGNLSHWLDTLPAQLSAWQRESLHGKFKQWFNSVEHLPALTPTRLDLLNGVRAEMDTPLSPGQLEGIE
KMLRTMMPWRKGPFSLYGIDIDTEWHSDWKWDRVLPHISPLAGRTILDVGCGSGYHLWRMLGAGAQLAVGIDPMQLFLCQ
FEAVRKLLGGDQRAHLLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSEGELVLETLVIEGDRNQVLVPG
DRYAQMRNVYFIPSAEALKCWLEKCGFVDVKIADMCVTSTEEQRRTDWMTSESLAEFLDPNDPGKTIEGYPSPLRAVLVA
RKP

Sequences:

>Translated_323_residues
MIEFGDFYQRIAKGNLSHWLDTLPAQLSAWQRESLHGKFKQWFNSVEHLPALTPTRLDLLNGVRAEMDTPLSPGQLEGIE
KMLRTMMPWRKGPFSLYGIDIDTEWHSDWKWDRVLPHISPLAGRTILDVGCGSGYHLWRMLGAGAQLAVGIDPMQLFLCQ
FEAVRKLLGGDQRAHLLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSEGELVLETLVIEGDRNQVLVPG
DRYAQMRNVYFIPSAEALKCWLEKCGFVDVKIADMCVTSTEEQRRTDWMTSESLAEFLDPNDPGKTIEGYPSPLRAVLVA
RKP
>Mature_323_residues
MIEFGDFYQRIAKGNLSHWLDTLPAQLSAWQRESLHGKFKQWFNSVEHLPALTPTRLDLLNGVRAEMDTPLSPGQLEGIE
KMLRTMMPWRKGPFSLYGIDIDTEWHSDWKWDRVLPHISPLAGRTILDVGCGSGYHLWRMLGAGAQLAVGIDPMQLFLCQ
FEAVRKLLGGDQRAHLLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSEGELVLETLVIEGDRNQVLVPG
DRYAQMRNVYFIPSAEALKCWLEKCGFVDVKIADMCVTSTEEQRRTDWMTSESLAEFLDPNDPGKTIEGYPSPLRAVLVA
RKP

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=323, Percent_Identity=77.7089783281734, Blast_Score=538, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_SERP5 (A8GFJ8)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479016.1
- ProteinModelPortal:   A8GFJ8
- STRING:   A8GFJ8
- GeneID:   5603949
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2787
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- ProtClustDB:   PRK15068
- BioCyc:   SPRO399741:SPRO_2787-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 36689; Mature: 36689

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFGDFYQRIAKGNLSHWLDTLPAQLSAWQRESLHGKFKQWFNSVEHLPALTPTRLDLL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NGVRAEMDTPLSPGQLEGIEKMLRTMMPWRKGPFSLYGIDIDTEWHSDWKWDRVLPHISP
HCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRTILDVGCGSGYHLWRMLGAGAQLAVGIDPMQLFLCQFEAVRKLLGGDQRAHLLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSEGELVLETLVIEGDRNQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEEECCCCEEEECC
DRYAQMRNVYFIPSAEALKCWLEKCGFVDVKIADMCVTSTEEQRRTDWMTSESLAEFLDP
HHHHHHCCEEECCCHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHCCCHHHHHHHCCC
NDPGKTIEGYPSPLRAVLVARKP
CCCCCCCCCCCCHHHHHEECCCC
>Mature Secondary Structure
MIEFGDFYQRIAKGNLSHWLDTLPAQLSAWQRESLHGKFKQWFNSVEHLPALTPTRLDLL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NGVRAEMDTPLSPGQLEGIEKMLRTMMPWRKGPFSLYGIDIDTEWHSDWKWDRVLPHISP
HCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRTILDVGCGSGYHLWRMLGAGAQLAVGIDPMQLFLCQFEAVRKLLGGDQRAHLLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSEGELVLETLVIEGDRNQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEEECCCCEEEECC
DRYAQMRNVYFIPSAEALKCWLEKCGFVDVKIADMCVTSTEEQRRTDWMTSESLAEFLDP
HHHHHHCCEEECCCHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHCCCHHHHHHHCCC
NDPGKTIEGYPSPLRAVLVARKP
CCCCCCCCCCCCHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA