| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is nudG [H]
Identifier: 157370956
GI number: 157370956
Start: 2992738
End: 2993139
Strand: Direct
Name: nudG [H]
Synonym: Spro_2716
Alternate gene names: 157370956
Gene position: 2992738-2993139 (Clockwise)
Preceding gene: 157370955
Following gene: 157370962
Centisome position: 54.92
GC content: 55.47
Gene sequence:
>402_bases ATGAAAATTATCGATGTCGTCGCCGCCATCATTGAAAGAAATGGCAAAATTCTTTTGGCGCAGCGTAATGCTGACAGCGA TCAGGCCGGATTGTGGGAGTTTCCCGGCGGCAAGGTTGAGGCAGGCGAGAGCCAGCCACAGGCACTGGCGCGTGAACTGG ACGAAGAGTTGGGAATTGTGGCCAGTGTTGGCCGCTATGTCGCCAGCAACCAGTGGCAACAGAGTGAGCGAATGATCCGG CTACATGCCTGGCAGGTTGATACCTTTAGCGGTGAATTACAAAACCGCTGCCATTCGGATTTTGTCTGGTTGGCGCCGGA GCAGGCGTTTGACTATCCCCTGGCCCCGGCGGACGTACCGCTATTAACCGCCTATATTAGCGCATTGCAGGCGGAAGCCT GA
Upstream 100 bases:
>100_bases CGGGATGGAAAAACCGTCGGATCACGCGCCAGTCTGGGCGGAATTCTCACTGTAATTGACCCAACCCCGGCCATTGCCGG GGTTTTGCTATGTGGTACCT
Downstream 100 bases:
>100_bases GTTACAGCGTCACTTCTTCAGACGCACCCAGATTAACGGATTAGTCCCTACCACGTTGGGGTCGCGTACGCACTGCAACG CTTCCCCTTCCACCTTGAGA
Product: pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKIIDVVAAIIERNGKILLAQRNADSDQAGLWEFPGGKVEAGESQPQALARELDEELGIVASVGRYVASNQWQQSERMIR LHAWQVDTFSGELQNRCHSDFVWLAPEQAFDYPLAPADVPLLTAYISALQAEA
Sequences:
>Translated_133_residues MKIIDVVAAIIERNGKILLAQRNADSDQAGLWEFPGGKVEAGESQPQALARELDEELGIVASVGRYVASNQWQQSERMIR LHAWQVDTFSGELQNRCHSDFVWLAPEQAFDYPLAPADVPLLTAYISALQAEA >Mature_133_residues MKIIDVVAAIIERNGKILLAQRNADSDQAGLWEFPGGKVEAGESQPQALARELDEELGIVASVGRYVASNQWQQSERMIR LHAWQVDTFSGELQNRCHSDFVWLAPEQAFDYPLAPADVPLLTAYISALQAEA
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=127, Percent_Identity=66.9291338582677, Blast_Score=169, Evalue=8e-44, Organism=Escherichia coli, GI1786288, Length=125, Percent_Identity=34.4, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 14723; Mature: 14723
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIDVVAAIIERNGKILLAQRNADSDQAGLWEFPGGKVEAGESQPQALARELDEELGIV CHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHHHHHHH ASVGRYVASNQWQQSERMIRLHAWQVDTFSGELQNRCHSDFVWLAPEQAFDYPLAPADVP HHHHHHHHCCCHHHHHHEEHHHEEECCCCCHHHHHHHCCCEEEECCHHHCCCCCCCCCHH LLTAYISALQAEA HHHHHHHHHHCCC >Mature Secondary Structure MKIIDVVAAIIERNGKILLAQRNADSDQAGLWEFPGGKVEAGESQPQALARELDEELGIV CHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHHHHHHH ASVGRYVASNQWQQSERMIRLHAWQVDTFSGELQNRCHSDFVWLAPEQAFDYPLAPADVP HHHHHHHHCCCHHHHHHEEHHHEEECCCCCHHHHHHHCCCEEEECCHHHCCCCCCCCCHH LLTAYISALQAEA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]