| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is cstA [H]
Identifier: 157370879
GI number: 157370879
Start: 2906758
End: 2908815
Strand: Direct
Name: cstA [H]
Synonym: Spro_2639
Alternate gene names: 157370879
Gene position: 2906758-2908815 (Clockwise)
Preceding gene: 157370878
Following gene: 157370881
Centisome position: 53.35
GC content: 57.34
Gene sequence:
>2058_bases ATGAAAAACGTCAAGTCCTGGATCATCTGGCTGGCGGTGGCGTTGGTGGGCGCATTTGCCTTCGCCATGCTGGCGCTAAG CCGTGGGGAGCATGTCAATGCGGTTTGGCTAGTCGTCGCAGCGGTCGCCTGCTACAGCATCGCTTACCGCTTCTACAGCC TGTTTATTGCCAAGAAAGTATTTGAGCTCGACGATCGCCGCAAGACGCCGGCAGAACGTCGCAACGACGGGCTGGACTAT GTGCCCACCAACAAATGGGTGTTGTTTGGACACCATTTTGCCGCCATCGCCGGTGCCGGGCCGTTGGTTGGCCCGATCCT GGCAGCACAAATGGGCTTTCTGCCCGGCACCATCTGGATCCTGGTTGGGGTGATGTTGGCCGGTGCCGTGCAGGACTTCC TGATCCTGTTTATCTCCACTCGCCGCGATGGACGTTCGCTGGGTGAAATGGCCAAGCAGGAACTGGGGGCTTTCGCCGGG GTGATCACCATGCTGGGTGCGCTGGGGGTGATGATTATCATTCTGTCTGCGCTGGCGCTGGTGGTGGTAAAAGCGTTGGC CGACAGCCCATGGGGCCTGTTCACTATCGCCGCCACCATTCCTATCGCACTGTTTATGGGCGTGTATATGCGTTTTATCC GGCCGGGTAAAATCGCCGAAATTTCGGTGGTGGGTTTTGCCCTGATGCTGCTGGCGATTATTTACGGCGGTAATGTGGCG CAAGACCCCTACTGGGGCCCGTTCTTCACGCTGCACGGTACTACGCTGACCTGGGTACTGGTCGTCTACGGCTTTGTCGC CTCGGTGCTGCCGGTGTGGTTGCTGTTGGCACCGCGTGACTATCTGTCCACCTTTATGAAGATTGGCGTCATTATCGGGC TGGCGATTGGCATTGTCTTCGCCATGCCGGAAATGAAAATGCCGGCGGTATCGCGCTTTATCGACGGTAGCGGCCCGGTG TTCGCCGGATCGCTGTTCCCGTTCCTGTTTATTACCATCGCCTGCGGCTCGATTTCCGGCTTCCATGCGCTGGTGTCCAG CGGCACGACACCGAAACTGGTGGAGCGTGAAAGCCATATCCGCTTTATCGGCTACGGTGCCATGTTGATGGAGTCCTTCG TGGCCATCATGGCGCTGATCTGCGCCTCGGTTATCGATCCGGGCGTTTACTTCGCCATGAACTCACCGGCGGCGCTGATC GGCACCACGGTGGAAAATGCCTCGCAGGTGATTAACAGCTGGGGCTTTATGATCACCCCGGAAACCCTGACGATGATTGC CAAAGACGTCGGGGAGCACTCGATTCTGTCCCGTGCCGGTGGCGCACCGACCTTTGCGGTAGGTATGGCGCACATCATTA CCGAGGTATTTAACAGCCGCGCGATGATGGCGTTTTGGTATCACTTCGCCATTTTGTTCGAGGCCCTGTTTATTTTGACC GCCGTCGATGCCGGCACCCGTGCCTGTCGCTTTATGGTGCAGGATTTGGTTGGCGTGGCGATCCCACGGCTGGCCAACAA CCGTTCGTGGTTCGGTAATCTGGCGGGGACTACGGTGGCAGTCGCAGGCTGGGGCTTCTTTGTCTATCAGGGGGTGGTCG ATCCGCTCGGTGGCATCAATACCCTGTGGCCGCTGTTCGGTATCGGTAACCAGATGCTGGCGTCGATGGCGCTGATCCTC GGTACCGTGGTGCTGTTCAAAATGAAAAAACAGCGCTACGCCTGGGTGACTATCCTGCCCACCGTCTGGTTGTTTATCAC CTCAATGACCGCCGGCTGGCAGAAGATCTTCCATGAAAAACCGAGTATCGGCTTCCTGGCACAGGCGAAGAAATTCTCTA CCGGTATTGAGCAAGGTACGTTAATCGCACCGGCCAAGACGTTAAAGGATATGGAAACCATCGTGTTCAGCAACCAGATT AACGCCGCGCTCTGTGCTTTCTTTATGCTGGTGGCGGTAACCATGCTGGTCTCCGCCTTCTTTGTGATCCGCCGTGCGCT GAACTCCAGCCAACCTACCGCTCAGGAGTCACCGATCGTCCTGCGTGAGAATGGGTAA
Upstream 100 bases:
>100_bases ACTTGCTGTTCTTCACGCACAAAACTCCTACTTTTAATTTGTATCCATTCTCCAATAAGAGCTTCTTTTTTTATTTCTGC GCACCAAGGAGTTGTTGATC
Downstream 100 bases:
>100_bases ACCTGCGATTGGGCGCGGCATGCAGCGCCCCTACCTCTAAACAACCGGGCACTTGGTCAGTGCCCTTTTCTTTGTTTACA ACTCAGTTCAATAAATTAGT
Product: carbon starvation protein CstA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 685; Mature: 685
Protein sequence:
>685_residues MKNVKSWIIWLAVALVGAFAFAMLALSRGEHVNAVWLVVAAVACYSIAYRFYSLFIAKKVFELDDRRKTPAERRNDGLDY VPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMLAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAG VITMLGALGVMIIILSALALVVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEISVVGFALMLLAIIYGGNVA QDPYWGPFFTLHGTTLTWVLVVYGFVASVLPVWLLLAPRDYLSTFMKIGVIIGLAIGIVFAMPEMKMPAVSRFIDGSGPV FAGSLFPFLFITIACGSISGFHALVSSGTTPKLVERESHIRFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALI GTTVENASQVINSWGFMITPETLTMIAKDVGEHSILSRAGGAPTFAVGMAHIITEVFNSRAMMAFWYHFAILFEALFILT AVDAGTRACRFMVQDLVGVAIPRLANNRSWFGNLAGTTVAVAGWGFFVYQGVVDPLGGINTLWPLFGIGNQMLASMALIL GTVVLFKMKKQRYAWVTILPTVWLFITSMTAGWQKIFHEKPSIGFLAQAKKFSTGIEQGTLIAPAKTLKDMETIVFSNQI NAALCAFFMLVAVTMLVSAFFVIRRALNSSQPTAQESPIVLRENG
Sequences:
>Translated_685_residues MKNVKSWIIWLAVALVGAFAFAMLALSRGEHVNAVWLVVAAVACYSIAYRFYSLFIAKKVFELDDRRKTPAERRNDGLDY VPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMLAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAG VITMLGALGVMIIILSALALVVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEISVVGFALMLLAIIYGGNVA QDPYWGPFFTLHGTTLTWVLVVYGFVASVLPVWLLLAPRDYLSTFMKIGVIIGLAIGIVFAMPEMKMPAVSRFIDGSGPV FAGSLFPFLFITIACGSISGFHALVSSGTTPKLVERESHIRFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALI GTTVENASQVINSWGFMITPETLTMIAKDVGEHSILSRAGGAPTFAVGMAHIITEVFNSRAMMAFWYHFAILFEALFILT AVDAGTRACRFMVQDLVGVAIPRLANNRSWFGNLAGTTVAVAGWGFFVYQGVVDPLGGINTLWPLFGIGNQMLASMALIL GTVVLFKMKKQRYAWVTILPTVWLFITSMTAGWQKIFHEKPSIGFLAQAKKFSTGIEQGTLIAPAKTLKDMETIVFSNQI NAALCAFFMLVAVTMLVSAFFVIRRALNSSQPTAQESPIVLRENG >Mature_685_residues MKNVKSWIIWLAVALVGAFAFAMLALSRGEHVNAVWLVVAAVACYSIAYRFYSLFIAKKVFELDDRRKTPAERRNDGLDY VPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMLAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAG VITMLGALGVMIIILSALALVVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEISVVGFALMLLAIIYGGNVA QDPYWGPFFTLHGTTLTWVLVVYGFVASVLPVWLLLAPRDYLSTFMKIGVIIGLAIGIVFAMPEMKMPAVSRFIDGSGPV FAGSLFPFLFITIACGSISGFHALVSSGTTPKLVERESHIRFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALI GTTVENASQVINSWGFMITPETLTMIAKDVGEHSILSRAGGAPTFAVGMAHIITEVFNSRAMMAFWYHFAILFEALFILT AVDAGTRACRFMVQDLVGVAIPRLANNRSWFGNLAGTTVAVAGWGFFVYQGVVDPLGGINTLWPLFGIGNQMLASMALIL GTVVLFKMKKQRYAWVTILPTVWLFITSMTAGWQKIFHEKPSIGFLAQAKKFSTGIEQGTLIAPAKTLKDMETIVFSNQI NAALCAFFMLVAVTMLVSAFFVIRRALNSSQPTAQESPIVLRENG
Specific function: Peptide utilization during carbon starvation [H]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=683, Percent_Identity=61.2005856515373, Blast_Score=860, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=707, Percent_Identity=56.2942008486563, Blast_Score=811, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 74227; Mature: 74227
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVKSWIIWLAVALVGAFAFAMLALSRGEHVNAVWLVVAAVACYSIAYRFYSLFIAKKV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FELDDRRKTPAERRNDGLDYVPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWI HHHHCCCCCCHHHCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHCCCCHHHHH LVGVMLAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAGVITMLGALGVMIIILSALAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEISVVGFALMLLAIIYGGNVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC QDPYWGPFFTLHGTTLTWVLVVYGFVASVLPVWLLLAPRDYLSTFMKIGVIIGLAIGIVF CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AMPEMKMPAVSRFIDGSGPVFAGSLFPFLFITIACGSISGFHALVSSGTTPKLVERESHI HCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCE RFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALIGTTVENASQVINSWGFMITP EEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEECH ETLTMIAKDVGEHSILSRAGGAPTFAVGMAHIITEVFNSRAMMAFWYHFAILFEALFILT HHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AVDAGTRACRFMVQDLVGVAIPRLANNRSWFGNLAGTTVAVAGWGFFVYQGVVDPLGGIN HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH TLWPLFGIGNQMLASMALILGTVVLFKMKKQRYAWVTILPTVWLFITSMTAGWQKIFHEK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSIGFLAQAKKFSTGIEQGTLIAPAKTLKDMETIVFSNQINAALCAFFMLVAVTMLVSAF CCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FVIRRALNSSQPTAQESPIVLRENG HHHHHHHCCCCCCCCCCCEEEECCC >Mature Secondary Structure MKNVKSWIIWLAVALVGAFAFAMLALSRGEHVNAVWLVVAAVACYSIAYRFYSLFIAKKV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FELDDRRKTPAERRNDGLDYVPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWI HHHHCCCCCCHHHCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHCCCCHHHHH LVGVMLAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAGVITMLGALGVMIIILSALAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEISVVGFALMLLAIIYGGNVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC QDPYWGPFFTLHGTTLTWVLVVYGFVASVLPVWLLLAPRDYLSTFMKIGVIIGLAIGIVF CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AMPEMKMPAVSRFIDGSGPVFAGSLFPFLFITIACGSISGFHALVSSGTTPKLVERESHI HCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCE RFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALIGTTVENASQVINSWGFMITP EEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEECH ETLTMIAKDVGEHSILSRAGGAPTFAVGMAHIITEVFNSRAMMAFWYHFAILFEALFILT HHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AVDAGTRACRFMVQDLVGVAIPRLANNRSWFGNLAGTTVAVAGWGFFVYQGVVDPLGGIN HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH TLWPLFGIGNQMLASMALILGTVVLFKMKKQRYAWVTILPTVWLFITSMTAGWQKIFHEK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSIGFLAQAKKFSTGIEQGTLIAPAKTLKDMETIVFSNQINAALCAFFMLVAVTMLVSAF CCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FVIRRALNSSQPTAQESPIVLRENG HHHHHHHCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1848300; 9278503; 2521622 [H]