Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is yurR [H]

Identifier: 157370689

GI number: 157370689

Start: 2681446

End: 2682501

Strand: Direct

Name: yurR [H]

Synonym: Spro_2449

Alternate gene names: 157370689

Gene position: 2681446-2682501 (Clockwise)

Preceding gene: 157370687

Following gene: 157370691

Centisome position: 49.21

GC content: 52.37

Gene sequence:

>1056_bases
ATGTGTACCACAGAGAAACATATGATTGTTATCGGCGCGGGAATTATGGGGGCATCAATAGCCTATCATTTGGCAAGCCG
CGGGATAAAAGTGACGGTCATTGATAAAGACCAACCTTCTTCTGGCGCTACCGGCAGCTCTTTTGGCTGGATCCACACGA
CAGTAAGTGATGATGCACCTGATGCTTATCTTCGCCGCGCCTCGGTGGCCGATTGGCAGCGACTGGAAAAAGAAATCCCG
GAGCTTTGGGTGAATTGGACTGGTGCACTAAGTTATGACGATGAATCGCTGGAAAGTCAGCCCAATGAAAACCTGCTTCA
ACAACCCGAGATATCCAGGCTTGAACCCGCGTTTAACAACCCGCCACGGCGTGCATATTATGCGGTTTATGATGGTGCTG
TCGACCCCATCGATGCCACGCACGCCCTGCTGGAAAAGGCTTGTAGCTTGGGCGCTACGCTGAAAATTCAAACGCCGGTC
ATCGGTTTTCTCCAAAATGGCAACCATGTTACCGGCATCCAAACCCCGGAGGGCGTATTAAATGCGGATGCGGTTATCCT
GGCCTGCGGAACAGGTATAACTCCCCTACTTGCTACCATTGGGATCCCGTTGCCGATCCTGGCGTCACCGGCAATTCTGT
TACGGTTCGGCACCGAAAAACATTTAATTAACACCCTGATTTCTGGTCATGATGTAGAAGCCCGGCATGCCCGTAACGGT
GATATTTTGGCTGCGGAAGACTATCCGCTATCGGGCAATACCGATAATGTCGCCGCTGAGACCCTGGCAGCGATGAAATC
AGGATTGAACGGCGCAGCTTCGCTGCACTTACTGAGCCAATCGGTGGGACAGCGCCCAGTGCCGGAAGATGGATGTCCGG
TCATCGGATTTGTCGGTGAGAGGCCTGGAGTTTATGTTGCCGTCATGCATCCGGCGGTAACCTGTGCGGCTACCCTGGGC
AGAATGGTCAGTGAAGAGCTGATCAGCGGTAATAACCCGGAAATACCTGCAATTTATCGTCCTCGCCGCATCACTTCTGA
CCCAAAACAATCTTAA

Upstream 100 bases:

>100_bases
TCATGGGAAAAGCTCCCTTTGCTATCAAGTCCAAAATACCTCTGCACGATTGGGCTATTCTATGGGATAGTCAGCCCGGT
TTGTATACAGGGAACTCAGG

Downstream 100 bases:

>100_bases
TAACGGCAATCGTCGCAGGACTTCACCTGGCGACGATTACCGATGAAGATACTCAAATAATGTATGAAAGCAGGAAGGTC
ATGCCCAGCGCCAATACCGA

Product: FAD dependent oxidoreductase

Products: Dihydroxyacetone phosphate; Ubiquinol-8 [C]

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAPDAYLRRASVADWQRLEKEIP
ELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNNPPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPV
IGFLQNGNHVTGIQTPEGVLNADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG
DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGERPGVYVAVMHPAVTCAATLG
RMVSEELISGNNPEIPAIYRPRRITSDPKQS

Sequences:

>Translated_351_residues
MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAPDAYLRRASVADWQRLEKEIP
ELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNNPPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPV
IGFLQNGNHVTGIQTPEGVLNADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG
DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGERPGVYVAVMHPAVTCAATLG
RMVSEELISGNNPEIPAIYRPRRITSDPKQS
>Mature_351_residues
MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAPDAYLRRASVADWQRLEKEIP
ELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNNPPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPV
IGFLQNGNHVTGIQTPEGVLNADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG
DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGERPGVYVAVMHPAVTCAATLG
RMVSEELISGNNPEIPAIYRPRRITSDPKQS

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Fumarate Or Nitrate As Electron Acceptor. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.1.99.5 [C]

Molecular weight: Translated: 37365; Mature: 37365

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAP
CCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC
DAYLRRASVADWQRLEKEIPELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNN
HHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCHHCCCCHHHCCCCCCC
PPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPVIGFLQNGNHVTGIQTPEGVL
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEECCCCCCCCC
NADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG
CCCEEEEEECCCHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHHHCCCCCCHHHCCCC
DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGE
CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECC
RPGVYVAVMHPAVTCAATLGRMVSEELISGNNPEIPAIYRPRRITSDPKQS
CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MCTTEKHMIVIGAGIMGASIAYHLASRGIKVTVIDKDQPSSGATGSSFGWIHTTVSDDAP
CCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC
DAYLRRASVADWQRLEKEIPELWVNWTGALSYDDESLESQPNENLLQQPEISRLEPAFNN
HHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCHHCCCCHHHCCCCCCC
PPRRAYYAVYDGAVDPIDATHALLEKACSLGATLKIQTPVIGFLQNGNHVTGIQTPEGVL
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEECCCCCCCCC
NADAVILACGTGITPLLATIGIPLPILASPAILLRFGTEKHLINTLISGHDVEARHARNG
CCCEEEEEECCCHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHHHCCCCCCHHHCCCC
DILAAEDYPLSGNTDNVAAETLAAMKSGLNGAASLHLLSQSVGQRPVPEDGCPVIGFVGE
CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECC
RPGVYVAVMHPAVTCAATLGRMVSEELISGNNPEIPAIYRPRRITSDPKQS
CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glycerol 3-phosphate; Ubiquinone-8 [C]

Specific reaction: Glycerol 3-phosphate + Ubiquinone-8 --> Dihydroxyacetone phosphate + Ubiquinol-8 [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]