| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hisA
Identifier: 157369854
GI number: 157369854
Start: 1765713
End: 1766450
Strand: Reverse
Name: hisA
Synonym: Spro_1611
Alternate gene names: 157369854
Gene position: 1766450-1765713 (Counterclockwise)
Preceding gene: 157369855
Following gene: 157369853
Centisome position: 32.42
GC content: 60.3
Gene sequence:
>738_bases ATGATTATTCCGGCTTTGGATTTGATCGACGGCAACGTAGTGCGTCTGCATCAGGGCGATTACGGCCAGCAGCGCGACTA CGGTAACGATCCATTGTTACGCCTGCAGGACTATCAGCAACAGGGCGCACAGGTGCTGCATCTGGTCGACCTGACCGGCG CGAAAGACCCGACCGCGCGCCAAATCCCCCTGCTGCGCAAGCTGCTGGCGGGGGTTAACGTACCGGTACAGGTTGGCGGC GGCATTCGCAATGAGCAGGACGTCGCTGCCCTGCTGGAGGCCGGCGCAACCCGCGTGGTAATCGGCTCCACCGCGGTAAA ACAGCCGCAGCTGGTACAGGGCTGGTTCGAACGCTACGGCGCGGACGCCATGGTACTGGCGCTGGACGTGCGCATTGACG CAGACGGCACCAAACGCGTGGCGATCAGCGGCTGGCAGGAAAACTCGGATGCCACGCTGGAACAGGTGGTTGAGCAGTTC TTGCCTTATGGCCTCAAACACGTGCTGTGCACCGATATTTCCCGTGACGGGACATTGGCCGGTTCCAACGTGGCGCTGTA TCAGGAAATCAGCCAACGATATCCGCAGATCGCCTTCCAGGCCTCTGGCGGTATCGGTAATCTGGATGATATCGCCCAGC TGCGCGGCAGTGGCGTTGAGGGTGTGATTGTGGGGCGTGCCCTGCTGGAAGGTAAGTTTAGCGTTGAGGAGGCAATCGCA TGCTGGCAAAACGGATAA
Upstream 100 bases:
>100_bases CCGTGCAAAAAGACAATTTCTTCGGCGTGCAGTTTCATCCAGAGCGATCTGGCGCGGCCGGTGCGCAACTGTTGAAAAAC TTTCTGGAGATGTAGGCAGC
Downstream 100 bases:
>100_bases TCCCGTGCCTGGATGTTAAAGACGGGCAGGTAGTGAAAGGCGTGCAGTTCCGCAACCATGAAATTATCGGCGACATCGTG CCACTGGCGCAGCGCTATGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIIPALDLIDGNVVRLHQGDYGQQRDYGNDPLLRLQDYQQQGAQVLHLVDLTGAKDPTARQIPLLRKLLAGVNVPVQVGG GIRNEQDVAALLEAGATRVVIGSTAVKQPQLVQGWFERYGADAMVLALDVRIDADGTKRVAISGWQENSDATLEQVVEQF LPYGLKHVLCTDISRDGTLAGSNVALYQEISQRYPQIAFQASGGIGNLDDIAQLRGSGVEGVIVGRALLEGKFSVEEAIA CWQNG
Sequences:
>Translated_245_residues MIIPALDLIDGNVVRLHQGDYGQQRDYGNDPLLRLQDYQQQGAQVLHLVDLTGAKDPTARQIPLLRKLLAGVNVPVQVGG GIRNEQDVAALLEAGATRVVIGSTAVKQPQLVQGWFERYGADAMVLALDVRIDADGTKRVAISGWQENSDATLEQVVEQF LPYGLKHVLCTDISRDGTLAGSNVALYQEISQRYPQIAFQASGGIGNLDDIAQLRGSGVEGVIVGRALLEGKFSVEEAIA CWQNG >Mature_245_residues MIIPALDLIDGNVVRLHQGDYGQQRDYGNDPLLRLQDYQQQGAQVLHLVDLTGAKDPTARQIPLLRKLLAGVNVPVQVGG GIRNEQDVAALLEAGATRVVIGSTAVKQPQLVQGWFERYGADAMVLALDVRIDADGTKRVAISGWQENSDATLEQVVEQF LPYGLKHVLCTDISRDGTLAGSNVALYQEISQRYPQIAFQASGGIGNLDDIAQLRGSGVEGVIVGRALLEGKFSVEEAIA CWQNG
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=244, Percent_Identity=78.6885245901639, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI1788336, Length=234, Percent_Identity=24.3589743589744, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_SERP5 (A8GC75)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477843.1 - ProteinModelPortal: A8GC75 - SMR: A8GC75 - STRING: A8GC75 - GeneID: 5603804 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1611 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: SPRO399741:SPRO_1611-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26413; Mature: 26413
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: ACT_SITE 7-7 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPALDLIDGNVVRLHQGDYGQQRDYGNDPLLRLQDYQQQGAQVLHLVDLTGAKDPTAR CCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHCCHHEEEEEECCCCCCCCHH QIPLLRKLLAGVNVPVQVGGGIRNEQDVAALLEAGATRVVIGSTAVKQPQLVQGWFERYG HHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHC ADAMVLALDVRIDADGTKRVAISGWQENSDATLEQVVEQFLPYGLKHVLCTDISRDGTLA CCEEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GSNVALYQEISQRYPQIAFQASGGIGNLDDIAQLRGSGVEGVIVGRALLEGKFSVEEAIA CCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHH CWQNG HHCCC >Mature Secondary Structure MIIPALDLIDGNVVRLHQGDYGQQRDYGNDPLLRLQDYQQQGAQVLHLVDLTGAKDPTAR CCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHCCHHEEEEEECCCCCCCCHH QIPLLRKLLAGVNVPVQVGGGIRNEQDVAALLEAGATRVVIGSTAVKQPQLVQGWFERYG HHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHC ADAMVLALDVRIDADGTKRVAISGWQENSDATLEQVVEQFLPYGLKHVLCTDISRDGTLA CCEEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GSNVALYQEISQRYPQIAFQASGGIGNLDDIAQLRGSGVEGVIVGRALLEGKFSVEEAIA CCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHH CWQNG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA