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The map label for this gene is ygbK [H]

Identifier: 157369734

GI number: 157369734

Start: 1625218

End: 1626480

Strand: Reverse

Name: ygbK [H]

Synonym: Spro_1491

Alternate gene names: 157369734

Gene position: 1626480-1625218 (Counterclockwise)

Preceding gene: 157369735

Following gene: 157369733

Centisome position: 29.85

GC content: 61.52

Gene sequence:

>1263_bases
ATGCTGCTCGGCGTCATTGCAGATGATTTTACCGGAGCCACCGATATTGCCAGCTTTCTGGTAGAAAACGGCCTGCCGAC
GGTGCAGTTGAACGGCGTGCCGCGGGATGACCTGCCGGTCGAAGCGCAGGCGGTGGTTATCAGCCTGAAGTCACGCTCCT
GCCCGGTGGCGCAGGCCATTGAGCAGTCGTTGCAGGCGTTGGCCTGGCTACAGCGCCAGGGTTGCCGGCAATTTTACTTC
AAATATTGTTCGACCTTCGACAGCACCGCGCAGGGCAATATCGGCCCGGTGACCGACGCCCTGCTTGATGCGTTGGGCGA
AAGCCAGACGGTGATTTCACCCGCGTTGCCAGTTAACGGCCGCACCGTATATCAGGGCTATCTGTTCGTGTCGGATCAGT
TGCTGGCAGAGTCCGGCATGCGCCACCATCCGGTAACGCCAATGACCGACAGTAACCTGCTGCGGCTGATGGAAGCACAG
GCTCAGGGACGCTGTGGGCTGGTGAACGCCGCAGAAATGGATCGCGGTGCCGGGGCGGTGGCTGAAAAACTACGGCAATT
GGCACTGCAGGGCATGCGTTACGCCGTGCTCGATACGCTGAATGAACAGCACTTGCTGACCCAGGGTGCGGCGCTGAAAG
ATATGAAGCTGGTGACCGGTGGCTCCGGCCTGGCGATTGGCCTGGCACGCCAATGGGCGCAACCGGGGCAAGGCAGCCCA
CAGGCCGCAGGAGCGCCGCAAGGAGCAAAAGCCGTGGTGTTGTCCGGTTCCTGTTCCACTATGACTAATCAACAGGTGGC
ACGTTACCGTCAACAGGCGGCCGCTATGGCGGTCGACGTGGCGCGGTGCCTGAATGATGCCGAGCGCACGGCCTATATCA
CCGAGCTGGCCGACTGGGTGCAACAGCAGGCGAGTGCCCCGCTGGCCCCTCTGCTGTACGCCACCGCAGAGCCGGAAAAA
CTGCAGCAGGTGCAACAGCAGTACGGTATGGCCGCCGCCAGCCAGGCGGTAGAGTCGCTGTTCGCCGGGGTGGTCAAACA
GCTCCAGCAGCGGGGTTTCAGCCGCTTTATCGTCGCCGGTGGCGAAACCTCTGGCGTGGTAACGCAGGCTCTGGGGATTC
GCGGTTTCCACATTGGCCCCTGTATTTCTCCCGGCGTGCCCTGGGTGCGTGCCATCGATCAGTCTATTTCACTGGCCCTG
AAATCGGGCAATTTTGGTGACGAGAACTTTTTCGCCCGGGCGCAAACGGAGTTCCCCCTATGA

Upstream 100 bases:

>100_bases
TCACCGCCGCCAGTAATGCCGGTTTCGGTAAAGAGGACGACAGTGCGGTGATCAAGATCTTCGCCGGTATCGACCTGCCG
CAAAAGAAGGAGAACGCATA

Downstream 100 bases:

>100_bases
CACTGACCACCGAACAACAGGCGCGTGAAGAAATGGTACGTCTGGGGGCCTCGTTCTTTCAGCGTGGCTACGCCACCGGG
TCTGCCGGTAATCTTTCGCT

Product: Hrp-dependent type III effector protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLLGVIADDFTGATDIASFLVENGLPTVQLNGVPRDDLPVEAQAVVISLKSRSCPVAQAIEQSLQALAWLQRQGCRQFYF
KYCSTFDSTAQGNIGPVTDALLDALGESQTVISPALPVNGRTVYQGYLFVSDQLLAESGMRHHPVTPMTDSNLLRLMEAQ
AQGRCGLVNAAEMDRGAGAVAEKLRQLALQGMRYAVLDTLNEQHLLTQGAALKDMKLVTGGSGLAIGLARQWAQPGQGSP
QAAGAPQGAKAVVLSGSCSTMTNQQVARYRQQAAAMAVDVARCLNDAERTAYITELADWVQQQASAPLAPLLYATAEPEK
LQQVQQQYGMAAASQAVESLFAGVVKQLQQRGFSRFIVAGGETSGVVTQALGIRGFHIGPCISPGVPWVRAIDQSISLAL
KSGNFGDENFFARAQTEFPL

Sequences:

>Translated_420_residues
MLLGVIADDFTGATDIASFLVENGLPTVQLNGVPRDDLPVEAQAVVISLKSRSCPVAQAIEQSLQALAWLQRQGCRQFYF
KYCSTFDSTAQGNIGPVTDALLDALGESQTVISPALPVNGRTVYQGYLFVSDQLLAESGMRHHPVTPMTDSNLLRLMEAQ
AQGRCGLVNAAEMDRGAGAVAEKLRQLALQGMRYAVLDTLNEQHLLTQGAALKDMKLVTGGSGLAIGLARQWAQPGQGSP
QAAGAPQGAKAVVLSGSCSTMTNQQVARYRQQAAAMAVDVARCLNDAERTAYITELADWVQQQASAPLAPLLYATAEPEK
LQQVQQQYGMAAASQAVESLFAGVVKQLQQRGFSRFIVAGGETSGVVTQALGIRGFHIGPCISPGVPWVRAIDQSISLAL
KSGNFGDENFFARAQTEFPL
>Mature_420_residues
MLLGVIADDFTGATDIASFLVENGLPTVQLNGVPRDDLPVEAQAVVISLKSRSCPVAQAIEQSLQALAWLQRQGCRQFYF
KYCSTFDSTAQGNIGPVTDALLDALGESQTVISPALPVNGRTVYQGYLFVSDQLLAESGMRHHPVTPMTDSNLLRLMEAQ
AQGRCGLVNAAEMDRGAGAVAEKLRQLALQGMRYAVLDTLNEQHLLTQGAALKDMKLVTGGSGLAIGLARQWAQPGQGSP
QAAGAPQGAKAVVLSGSCSTMTNQQVARYRQQAAAMAVDVARCLNDAERTAYITELADWVQQQASAPLAPLLYATAEPEK
LQQVQQQYGMAAASQAVESLFAGVVKQLQQRGFSRFIVAGGETSGVVTQALGIRGFHIGPCISPGVPWVRAIDQSISLAL
KSGNFGDENFFARAQTEFPL

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1011 [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=382, Percent_Identity=67.2774869109948, Blast_Score=509, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 44682; Mature: 44682

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGVIADDFTGATDIASFLVENGLPTVQLNGVPRDDLPVEAQAVVISLKSRSCPVAQAI
CEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHH
EQSLQALAWLQRQGCRQFYFKYCSTFDSTAQGNIGPVTDALLDALGESQTVISPALPVNG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCC
RTVYQGYLFVSDQLLAESGMRHHPVTPMTDSNLLRLMEAQAQGRCGLVNAAEMDRGAGAV
CEEEEEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHH
AEKLRQLALQGMRYAVLDTLNEQHLLTQGAALKDMKLVTGGSGLAIGLARQWAQPGQGSP
HHHHHHHHHHCCHHHHHHHCCHHHHHHCCCCHHCEEEEECCCCHHHHHHHHHCCCCCCCC
QAAGAPQGAKAVVLSGSCSTMTNQQVARYRQQAAAMAVDVARCLNDAERTAYITELADWV
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
QQQASAPLAPLLYATAEPEKLQQVQQQYGMAAASQAVESLFAGVVKQLQQRGFSRFIVAG
HHHHCCCCHHHHEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GETSGVVTQALGIRGFHIGPCISPGVPWVRAIDQSISLALKSGNFGDENFFARAQTEFPL
CCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MLLGVIADDFTGATDIASFLVENGLPTVQLNGVPRDDLPVEAQAVVISLKSRSCPVAQAI
CEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHH
EQSLQALAWLQRQGCRQFYFKYCSTFDSTAQGNIGPVTDALLDALGESQTVISPALPVNG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCC
RTVYQGYLFVSDQLLAESGMRHHPVTPMTDSNLLRLMEAQAQGRCGLVNAAEMDRGAGAV
CEEEEEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHH
AEKLRQLALQGMRYAVLDTLNEQHLLTQGAALKDMKLVTGGSGLAIGLARQWAQPGQGSP
HHHHHHHHHHCCHHHHHHHCCHHHHHHCCCCHHCEEEEECCCCHHHHHHHHHCCCCCCCC
QAAGAPQGAKAVVLSGSCSTMTNQQVARYRQQAAAMAVDVARCLNDAERTAYITELADWV
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
QQQASAPLAPLLYATAEPEKLQQVQQQYGMAAASQAVESLFAGVVKQLQQRGFSRFIVAG
HHHHCCCCHHHHEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GETSGVVTQALGIRGFHIGPCISPGVPWVRAIDQSISLALKSGNFGDENFFARAQTEFPL
CCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]