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The map label for this gene is ygbL [H]

Identifier: 157369733

GI number: 157369733

Start: 1624589

End: 1625221

Strand: Reverse

Name: ygbL [H]

Synonym: Spro_1490

Alternate gene names: 157369733

Gene position: 1625221-1624589 (Counterclockwise)

Preceding gene: 157369734

Following gene: 157369732

Centisome position: 29.83

GC content: 58.77

Gene sequence:

>633_bases
ATGACACTGACCACCGAACAACAGGCGCGTGAAGAAATGGTACGTCTGGGGGCCTCGTTCTTTCAGCGTGGCTACGCCAC
CGGGTCTGCCGGTAATCTTTCGCTGTTATTGGCGGACGGCACGCTACTGGCCACCCCCACCGGCTCCTGTCTGGGTGAAC
TGCAGGCCGATCGGTTGTCGAAAGTCAGCCTGAGCGGCGAATGGTTGTCCGGGGATAAACCGTCAAAAGAGATCAGTTTC
CACCGCGCGCTGTATCTGAACAACCCGGAATGCAAAGCGGTGGTGCACCTGCACTGTACCTATCTCACCGCCCTGTCCTG
CCTGCAGGGGTTGGACGTGGAGAATGCCATCAAACCCTTCACCCCTTATGTGGTGATGCGCGTCGGCAAGGTGCCGGTGG
TGCCTTACTATCGTCCCGGTGATTTGCGACTGGCAGAAGATCTGGCCAAGCTGGCACCGACGCACCGTGCTTTTTTGCTG
GCCAATCACGGCCCGGTGGTTACAGGTAAGAGCCTGCGTGCCGCGGCGGACAACACCGAAGAGATGGAGGATGCGGCGAA
GCTGATTTTCACCCTCGGCGAACGCCCGATTCGTTATTTGACCGATGATGAGATTGCCGAGCTACGGAGCTGA

Upstream 100 bases:

>100_bases
CCTGGGTGCGTGCCATCGATCAGTCTATTTCACTGGCCCTGAAATCGGGCAATTTTGGTGACGAGAACTTTTTCGCCCGG
GCGCAAACGGAGTTCCCCCT

Downstream 100 bases:

>100_bases
ATCATGCCAAAATTTGCTGCCAATTTATCGATGATGTTTACCGAACTGCCGTTTCTGGAGCGATTCGAGGCTGCGGCCGC
CGAAGGGTTCACCGCGGTGG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTLTTEQQAREEMVRLGASFFQRGYATGSAGNLSLLLADGTLLATPTGSCLGELQADRLSKVSLSGEWLSGDKPSKEISF
HRALYLNNPECKAVVHLHCTYLTALSCLQGLDVENAIKPFTPYVVMRVGKVPVVPYYRPGDLRLAEDLAKLAPTHRAFLL
ANHGPVVTGKSLRAAADNTEEMEDAAKLIFTLGERPIRYLTDDEIAELRS

Sequences:

>Translated_210_residues
MTLTTEQQAREEMVRLGASFFQRGYATGSAGNLSLLLADGTLLATPTGSCLGELQADRLSKVSLSGEWLSGDKPSKEISF
HRALYLNNPECKAVVHLHCTYLTALSCLQGLDVENAIKPFTPYVVMRVGKVPVVPYYRPGDLRLAEDLAKLAPTHRAFLL
ANHGPVVTGKSLRAAADNTEEMEDAAKLIFTLGERPIRYLTDDEIAELRS
>Mature_209_residues
TLTTEQQAREEMVRLGASFFQRGYATGSAGNLSLLLADGTLLATPTGSCLGELQADRLSKVSLSGEWLSGDKPSKEISFH
RALYLNNPECKAVVHLHCTYLTALSCLQGLDVENAIKPFTPYVVMRVGKVPVVPYYRPGDLRLAEDLAKLAPTHRAFLLA
NHGPVVTGKSLRAAADNTEEMEDAAKLIFTLGERPIRYLTDDEIAELRS

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=206, Percent_Identity=74.7572815533981, Blast_Score=323, Evalue=5e-90,
Organism=Escherichia coli, GI1789164, Length=199, Percent_Identity=33.1658291457286, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 22949; Mature: 22817

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTTEQQAREEMVRLGASFFQRGYATGSAGNLSLLLADGTLLATPTGSCLGELQADRLS
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHH
KVSLSGEWLSGDKPSKEISFHRALYLNNPECKAVVHLHCTYLTALSCLQGLDVENAIKPF
EEECCCCCCCCCCCCCHHEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCHHHCCCCC
TPYVVMRVGKVPVVPYYRPGDLRLAEDLAKLAPTHRAFLLANHGPVVTGKSLRAAADNTE
CCEEEEEECCCCCCCEECCCCCHHHHHHHHHCCCCEEEEEECCCCEEECCCCHHCCCCHH
EMEDAAKLIFTLGERPIRYLTDDEIAELRS
HHHHHHHHHHHHCCCCEEECCCHHHHHHCC
>Mature Secondary Structure 
TLTTEQQAREEMVRLGASFFQRGYATGSAGNLSLLLADGTLLATPTGSCLGELQADRLS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHH
KVSLSGEWLSGDKPSKEISFHRALYLNNPECKAVVHLHCTYLTALSCLQGLDVENAIKPF
EEECCCCCCCCCCCCCHHEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCHHHCCCCC
TPYVVMRVGKVPVVPYYRPGDLRLAEDLAKLAPTHRAFLLANHGPVVTGKSLRAAADNTE
CCEEEEEECCCCCCCEECCCCCHHHHHHHHHCCCCEEEEEECCCCEEECCCCHHCCCCHH
EMEDAAKLIFTLGERPIRYLTDDEIAELRS
HHHHHHHHHHHHCCCCEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]