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The map label for this gene is ybfE [H]

Identifier: 157369481

GI number: 157369481

Start: 1363003

End: 1363290

Strand: Reverse

Name: ybfE [H]

Synonym: Spro_1238

Alternate gene names: 157369481

Gene position: 1363290-1363003 (Counterclockwise)

Preceding gene: 157369482

Following gene: 157369480

Centisome position: 25.02

GC content: 54.51

Gene sequence:

>288_bases
ATGGCAAAAGAACAAACGGATCGCACGACGCTGGATCTGTTCGCAGATGAACGCCGTCCGGGGCGCCCGAAAACCAACCC
GCTATCCCGAGATGAACAGCTTAGAATCAATAAGCGTAATCAGCTTCGACGCGATAAAGTCCGTGGCTTACGGCGTGTGG
AACTGAAGATCAACGCGGATGCGGTGGACGCTCTGAACAAACTGGCGGAACAGCGGAACATCAGCCGCAGCGAGCTTATT
GAGCAAATGCTGTTGGCACAACTGGCGGACGACCAGCCAGAACATTGA

Upstream 100 bases:

>100_bases
GAATTTGGGTTAGGGTTTATTGGCCCGAAGTGTGTTAACCGAACCATCCAGAAGCGTCTACGCGCTTTTAGATGCAAACT
CCCTTGCAGTACCGCTACCT

Downstream 100 bases:

>100_bases
TCATTGCAGCCGCACATGCGGCGCGGCGTTAAGGATGACGCCCGATCAACATCATTTTATTCCACCCGGTATCGCATAAA
CGTGATAAAACCCCGGGGTA

Product: LexA regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MAKEQTDRTTLDLFADERRPGRPKTNPLSRDEQLRINKRNQLRRDKVRGLRRVELKINADAVDALNKLAEQRNISRSELI
EQMLLAQLADDQPEH

Sequences:

>Translated_95_residues
MAKEQTDRTTLDLFADERRPGRPKTNPLSRDEQLRINKRNQLRRDKVRGLRRVELKINADAVDALNKLAEQRNISRSELI
EQMLLAQLADDQPEH
>Mature_94_residues
AKEQTDRTTLDLFADERRPGRPKTNPLSRDEQLRINKRNQLRRDKVRGLRRVELKINADAVDALNKLAEQRNISRSELIE
QMLLAQLADDQPEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081770, Length=89, Percent_Identity=86.5168539325843, Blast_Score=156, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002145 [H]

Pfam domain/function: PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 11129; Mature: 10998

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEQTDRTTLDLFADERRPGRPKTNPLSRDEQLRINKRNQLRRDKVRGLRRVELKINAD
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHEEEECCH
AVDALNKLAEQRNISRSELIEQMLLAQLADDQPEH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKEQTDRTTLDLFADERRPGRPKTNPLSRDEQLRINKRNQLRRDKVRGLRRVELKINAD
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHEEEECCH
AVDALNKLAEQRNISRSELIEQMLLAQLADDQPEH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]