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The map label for this gene is yjgF [H]

Identifier: 157368788

GI number: 157368788

Start: 602093

End: 602479

Strand: Reverse

Name: yjgF [H]

Synonym: Spro_0543

Alternate gene names: 157368788

Gene position: 602479-602093 (Counterclockwise)

Preceding gene: 157368789

Following gene: 157368787

Centisome position: 11.06

GC content: 56.59

Gene sequence:

>387_bases
ATGTCACGTAACATCAGCACTGAACTCGCCCCGGCAGCCATTGGTCCTTACGTGCAGGGCGTTGATCTGGGCAGCATGAT
CATCACTTCCGGTCAGATCCCGGTCGATCCTAAAACCGGCGCCGTTGCCGACGACGTGGCCGCTCAGGCACGCCAGTCAC
TGGAAAACGTTAAAGCGATCGTTGAAGCTGCCGGCCTGAAAGTCGCCGACATCGTGAAAACCACGGTCTTCGTCAAAGAC
CTGAACGATTTCGCCACCGTTAACGCCGCTTATGAAAGCTTCTTCACCGAGCACAACGCGCCGTTCCCGGCCCGTTCTTG
CGTCGAAGTGGCCCGTCTGCCAAAAGACGTGAAAATCGAAATCGAAGCCATCGCCGTTCGTCGTTAA

Upstream 100 bases:

>100_bases
GAGTCTGCGGTTTTCGCCGGGAGACGGCGCTGTTATTCTCCCGGCGACGCCCTATAATGGGGTTTCTGGATAGAACAACC
CTCGATTATCAGGAGAAAAA

Downstream 100 bases:

>100_bases
TTCCACGACCGCGCACGCGCCCAACGGTCAGCCATCGGCTGGCCGTTTTTATTTCAGGAAATTATTATTCCAGTTATTTT
ATAAAGATAACCTCACTTCC

Product: putative endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSRNISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGAVADDVAAQARQSLENVKAIVEAAGLKVADIVKTTVFVKD
LNDFATVNAAYESFFTEHNAPFPARSCVEVARLPKDVKIEIEAIAVRR

Sequences:

>Translated_128_residues
MSRNISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGAVADDVAAQARQSLENVKAIVEAAGLKVADIVKTTVFVKD
LNDFATVNAAYESFFTEHNAPFPARSCVEVARLPKDVKIEIEAIAVRR
>Mature_127_residues
SRNISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGAVADDVAAQARQSLENVKAIVEAAGLKVADIVKTTVFVKDL
NDFATVNAAYESFFTEHNAPFPARSCVEVARLPKDVKIEIEAIAVRR

Specific function: May have a phosphotransferase activity [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=126, Percent_Identity=48.4126984126984, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI87082396, Length=128, Percent_Identity=89.0625, Blast_Score=229, Evalue=3e-62,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=70.8661417322835, Blast_Score=187, Evalue=2e-49,
Organism=Escherichia coli, GI1787245, Length=115, Percent_Identity=31.304347826087, Blast_Score=68, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982075, Length=122, Percent_Identity=45.0819672131148, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25148896, Length=122, Percent_Identity=45.0819672131148, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71982068, Length=122, Percent_Identity=45.0819672131148, Blast_Score=111, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6322138, Length=124, Percent_Identity=39.5161290322581, Blast_Score=95, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320899, Length=106, Percent_Identity=41.5094339622642, Blast_Score=89, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19921376, Length=123, Percent_Identity=43.0894308943089, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13612; Mature: 13480

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGAVADDVAAQARQSLENVKAI
CCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VEAAGLKVADIVKTTVFVKDLNDFATVNAAYESFFTEHNAPFPARSCVEVARLPKDVKIE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEE
IEAIAVRR
EEEEEECC
>Mature Secondary Structure 
SRNISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGAVADDVAAQARQSLENVKAI
CCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VEAAGLKVADIVKTTVFVKDLNDFATVNAAYESFFTEHNAPFPARSCVEVARLPKDVKIE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEE
IEAIAVRR
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]