| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368787
Identifier: 157368787
GI number: 157368787
Start: 597206
End: 598684
Strand: Reverse
Name: 157368787
Synonym: Spro_0540
Alternate gene names: NA
Gene position: 598684-597206 (Counterclockwise)
Preceding gene: 157368788
Following gene: 157368786
Centisome position: 10.99
GC content: 59.23
Gene sequence:
>1479_bases ATGCTGGATCCGTCTACAGCCTGCAATGTCGACGAGGTGACGATGCTAAATATCGATCTGTCCGCTTCACCGTTTTTTGA TGAGATGCTTCTGGCTGAGGGTAAACACCGGGGTCATTACGAAGCTTACTGCCATTGGCTGCAACAGGCCGATCACAAGG CCATTCAGCGTAAAAGGGAAGAGGCTGCACTGCTGTTTCATCGGGTGGGAATTACCTTTAACGTTTATGGTGAGGATGAT GGTGCCGAACGGCTAATCCCGTTCGACAGCGTGCCGCGCATCATTCCCGCCGGCGAATGGGCGATGCTCGATCGCGGCAT CCGCCAGCGCGTCCAGGCGCTGAACGCCTTTCTGCACGATATTTACCATCAACAACATATTCTGAAGGCCGGGATCATTC CGGCGGAACAGGTGCTGGCCAACGATCAATATCAACCCTGCATGCAAGGGGTCGATTTGCACCGCAATATTTACGCGCAC ATTGTCGGCGTGGATATGGTGCGCGGCGGCGACGGTCAGTATTACGTGCTGGAAGACAACCTGCGTACCCCGTCCGGCGT GTCCTACATGCTGGAAAACCGCAAAATGATGATGCGCCTGTACCCGGAACTGTTCGCCCAGCAGCGTATCGCACCGGTGG AACGCTACCCGTCGCACCTGCTGCAAACCCTGCGTGAAAGCTCGCCGATTAACGATCCGACCGTGGTAGTGCTGACGCCG GGCCGCTTCAACAGCGCCTATTTCGAACACAGTTTCCTGGCGCAGCAGATGGGGGTTGAGCTGGTGGAAAGCGCCGATCT GTTCGTCAAGGACGGCGCGGTGTTTATGCGCACCACCGCCGGGCCTTGCAAGGTGGACGTGATCTATCGGCGGGTAGACG ACGCCTTCCTCGATCCGCTGGCGTTCCGCCCGGACTCGATGCTCGGCGTGCCGGGGCTGCTGTCGGTATATCGCACCGGT AACGTGGTGCTGGCCAACGCCATTGGCACCGGCGTGGCCGACGACAAGTCGATCTATCCTTATGTGCCGGAGATGGTGCG CTTCTATCTGCAGGAGGAGCCGATCCTCAACAATGTGCCGACCTGGCAATGCCGTCACAAAAATGAGCTGTCGTACGTGC TGGCGAACCTGGAACAAATGGTAGTGAAAGAGGTTCACGGTGCCGGCGGCTACGGCATGCTGATCGGCCCGGCGGCGACC AAAGACGAAATCGCCCACTTCCGTACCCTGCTGCTGGCCAAACCGCACAACTATATTGCGCAAAACACGCTGGCACTGTC GACCTGCCCGACCTTCGTCAACGACGGCCTCGCGCCGCGGCATATCGATCTGCGGCCGTTTGCCCTCAGCGGTGCGGAAA TTCGCCTGGTGCCCGGCGGCCTGACGCGCGTAGCGCTGGCGCAAGGCTCGCTGGTGGTCAACTCGTCGCAAGGTGGGGGA ACCAAGGATACCTGGGTGTTGGAGGACGACGCATGCTGA
Upstream 100 bases:
>100_bases AAGGCAGCGTCCGGTTGGGTTGCACCCAAAGCGGGCCGTCTCCTGCCACAACCTGGCGTTTTCGCGCCATTATCGCCCCT TTATCACCTTGGCACATTTT
Downstream 100 bases:
>100_bases GCCGAACTGCCAGTGAACTCTATTGGATGGCCCGCTATCTGGAGCGGGCAGAAAGCATCGCCCGGGTACTCGACGTCACC AACAAGTTATCGATGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MLDPSTACNVDEVTMLNIDLSASPFFDEMLLAEGKHRGHYEAYCHWLQQADHKAIQRKREEAALLFHRVGITFNVYGEDD GAERLIPFDSVPRIIPAGEWAMLDRGIRQRVQALNAFLHDIYHQQHILKAGIIPAEQVLANDQYQPCMQGVDLHRNIYAH IVGVDMVRGGDGQYYVLEDNLRTPSGVSYMLENRKMMMRLYPELFAQQRIAPVERYPSHLLQTLRESSPINDPTVVVLTP GRFNSAYFEHSFLAQQMGVELVESADLFVKDGAVFMRTTAGPCKVDVIYRRVDDAFLDPLAFRPDSMLGVPGLLSVYRTG NVVLANAIGTGVADDKSIYPYVPEMVRFYLQEEPILNNVPTWQCRHKNELSYVLANLEQMVVKEVHGAGGYGMLIGPAAT KDEIAHFRTLLLAKPHNYIAQNTLALSTCPTFVNDGLAPRHIDLRPFALSGAEIRLVPGGLTRVALAQGSLVVNSSQGGG TKDTWVLEDDAC
Sequences:
>Translated_492_residues MLDPSTACNVDEVTMLNIDLSASPFFDEMLLAEGKHRGHYEAYCHWLQQADHKAIQRKREEAALLFHRVGITFNVYGEDD GAERLIPFDSVPRIIPAGEWAMLDRGIRQRVQALNAFLHDIYHQQHILKAGIIPAEQVLANDQYQPCMQGVDLHRNIYAH IVGVDMVRGGDGQYYVLEDNLRTPSGVSYMLENRKMMMRLYPELFAQQRIAPVERYPSHLLQTLRESSPINDPTVVVLTP GRFNSAYFEHSFLAQQMGVELVESADLFVKDGAVFMRTTAGPCKVDVIYRRVDDAFLDPLAFRPDSMLGVPGLLSVYRTG NVVLANAIGTGVADDKSIYPYVPEMVRFYLQEEPILNNVPTWQCRHKNELSYVLANLEQMVVKEVHGAGGYGMLIGPAAT KDEIAHFRTLLLAKPHNYIAQNTLALSTCPTFVNDGLAPRHIDLRPFALSGAEIRLVPGGLTRVALAQGSLVVNSSQGGG TKDTWVLEDDAC >Mature_492_residues MLDPSTACNVDEVTMLNIDLSASPFFDEMLLAEGKHRGHYEAYCHWLQQADHKAIQRKREEAALLFHRVGITFNVYGEDD GAERLIPFDSVPRIIPAGEWAMLDRGIRQRVQALNAFLHDIYHQQHILKAGIIPAEQVLANDQYQPCMQGVDLHRNIYAH IVGVDMVRGGDGQYYVLEDNLRTPSGVSYMLENRKMMMRLYPELFAQQRIAPVERYPSHLLQTLRESSPINDPTVVVLTP GRFNSAYFEHSFLAQQMGVELVESADLFVKDGAVFMRTTAGPCKVDVIYRRVDDAFLDPLAFRPDSMLGVPGLLSVYRTG NVVLANAIGTGVADDKSIYPYVPEMVRFYLQEEPILNNVPTWQCRHKNELSYVLANLEQMVVKEVHGAGGYGMLIGPAAT KDEIAHFRTLLLAKPHNYIAQNTLALSTCPTFVNDGLAPRHIDLRPFALSGAEIRLVPGGLTRVALAQGSLVVNSSQGGG TKDTWVLEDDAC
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 54908; Mature: 54908
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPSTACNVDEVTMLNIDLSASPFFDEMLLAEGKHRGHYEAYCHWLQQADHKAIQRKRE CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EAALLFHRVGITFNVYGEDDGAERLIPFDSVPRIIPAGEWAMLDRGIRQRVQALNAFLHD HHHHHHEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IYHQQHILKAGIIPAEQVLANDQYQPCMQGVDLHRNIYAHIVGVDMVRGGDGQYYVLEDN HHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCEEEEEEEEEEEECCCCCEEEEECC LRTPSGVSYMLENRKMMMRLYPELFAQQRIAPVERYPSHLLQTLRESSPINDPTVVVLTP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECC GRFNSAYFEHSFLAQQMGVELVESADLFVKDGAVFMRTTAGPCKVDVIYRRVDDAFLDPL CCCCCHHHHHHHHHHHHCHHHHHCCCEEEECCEEEEEECCCCCEEEHHHHHHHHHHHCCH AFRPDSMLGVPGLLSVYRTGNVVLANAIGTGVADDKSIYPYVPEMVRFYLQEEPILNNVP HCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC TWQCRHKNELSYVLANLEQMVVKEVHGAGGYGMLIGPAATKDEIAHFRTLLLAKPHNYIA CCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHH QNTLALSTCPTFVNDGLAPRHIDLRPFALSGAEIRLVPGGLTRVALAQGSLVVNSSQGGG HCCEEEECCCHHHCCCCCCCEECCCEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCC TKDTWVLEDDAC CCCCEEEECCCC >Mature Secondary Structure MLDPSTACNVDEVTMLNIDLSASPFFDEMLLAEGKHRGHYEAYCHWLQQADHKAIQRKRE CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EAALLFHRVGITFNVYGEDDGAERLIPFDSVPRIIPAGEWAMLDRGIRQRVQALNAFLHD HHHHHHEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IYHQQHILKAGIIPAEQVLANDQYQPCMQGVDLHRNIYAHIVGVDMVRGGDGQYYVLEDN HHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCEEEEEEEEEEEECCCCCEEEEECC LRTPSGVSYMLENRKMMMRLYPELFAQQRIAPVERYPSHLLQTLRESSPINDPTVVVLTP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECC GRFNSAYFEHSFLAQQMGVELVESADLFVKDGAVFMRTTAGPCKVDVIYRRVDDAFLDPL CCCCCHHHHHHHHHHHHCHHHHHCCCEEEECCEEEEEECCCCCEEEHHHHHHHHHHHCCH AFRPDSMLGVPGLLSVYRTGNVVLANAIGTGVADDKSIYPYVPEMVRFYLQEEPILNNVP HCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC TWQCRHKNELSYVLANLEQMVVKEVHGAGGYGMLIGPAATKDEIAHFRTLLLAKPHNYIA CCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHH QNTLALSTCPTFVNDGLAPRHIDLRPFALSGAEIRLVPGGLTRVALAQGSLVVNSSQGGG HCCEEEECCCHHHCCCCCCCEECCCEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCC TKDTWVLEDDAC CCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]