| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pyrI [H]
Identifier: 157368789
GI number: 157368789
Start: 602578
End: 603042
Strand: Reverse
Name: pyrI [H]
Synonym: Spro_0544
Alternate gene names: 157368789
Gene position: 603042-602578 (Counterclockwise)
Preceding gene: 157368790
Following gene: 157368788
Centisome position: 11.07
GC content: 55.05
Gene sequence:
>465_bases ATGACTCACGATAACAAACTGCAGGTTGAAGCGATCAAGTGCGGTACGGTGATTGACCATATTCCGGCGCAGATAGGTTT TAAGCTGCTGACGCTGTTTAAGCTGACCGCCACCGACCAGCGTATTACCATCGGCCTGAACCTGCCTTCAGGCGAGCTGG GCCGCAAAGACCTGATCAAAATCGAGAACACTTTCCTGACCGAACAGCAGGCCAACCAACTGGCGATGTATGCGCCCAAA GCCACGGTCAACCGTATCGACAATTACGAAGTGGTGCGCAAACTGACCCTCAGCCTGCCGGACCATATCGACGGCGTGCT GACCTGCCCGAACAGCAACTGCATCAGCCGCAGTGAGCCGGTGTCCTCCAGCTTTAGCGTGAAATCCCGCGACGGCGACG TACATCTGAAATGCCGCTACTGTGAGAAAGAGTTCGAACATCAGGTGGTGTTGCAGGCAGACTGA
Upstream 100 bases:
>100_bases CGCCTACTACTTCCAGCAGGCGGGCAACGGTATTTTCGCCCGTCAGGCGCTGTTGGCGCTGGTATTAAACGCAGATTTGG CTCTTTAAGGGGGAACCGTC
Downstream 100 bases:
>100_bases GTCTGCGGTTTTCGCCGGGAGACGGCGCTGTTATTCTCCCGGCGACGCCCTATAATGGGGTTTCTGGATAGAACAACCCT CGATTATCAGGAGAAAAAAT
Product: aspartate carbamoyltransferase regulatory subunit
Products: phosphate; N-carbamoyl-L-aspartate
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTHDNKLQVEAIKCGTVIDHIPAQIGFKLLTLFKLTATDQRITIGLNLPSGELGRKDLIKIENTFLTEQQANQLAMYAPK ATVNRIDNYEVVRKLTLSLPDHIDGVLTCPNSNCISRSEPVSSSFSVKSRDGDVHLKCRYCEKEFEHQVVLQAD
Sequences:
>Translated_154_residues MTHDNKLQVEAIKCGTVIDHIPAQIGFKLLTLFKLTATDQRITIGLNLPSGELGRKDLIKIENTFLTEQQANQLAMYAPK ATVNRIDNYEVVRKLTLSLPDHIDGVLTCPNSNCISRSEPVSSSFSVKSRDGDVHLKCRYCEKEFEHQVVLQAD >Mature_153_residues THDNKLQVEAIKCGTVIDHIPAQIGFKLLTLFKLTATDQRITIGLNLPSGELGRKDLIKIENTFLTEQQANQLAMYAPKA TVNRIDNYEVVRKLTLSLPDHIDGVLTCPNSNCISRSEPVSSSFSVKSRDGDVHLKCRYCEKEFEHQVVLQAD
Specific function: Involved in allosteric regulation of aspartate carbamoyltransferase [H]
COG id: COG1781
COG function: function code F; Aspartate carbamoyltransferase, regulatory subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrI family [H]
Homologues:
Organism=Escherichia coli, GI1790692, Length=151, Percent_Identity=80.1324503311258, Blast_Score=254, Evalue=2e-69,
Paralogues:
None
Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020545 - InterPro: IPR002801 - InterPro: IPR020542 - ProDom: PD006194 [H]
Pfam domain/function: PF01948 PyrI; PF02748 PyrI_C [H]
EC number: 2.1.3.2
Molecular weight: Translated: 17254; Mature: 17123
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHDNKLQVEAIKCGTVIDHIPAQIGFKLLTLFKLTATDQRITIGLNLPSGELGRKDLIK CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCEEE IENTFLTEQQANQLAMYAPKATVNRIDNYEVVRKLTLSLPDHIDGVLTCPNSNCISRSEP EHHHEECCHHCCEEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC VSSSFSVKSRDGDVHLKCRYCEKEFEHQVVLQAD CCCCCEEECCCCCEEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure THDNKLQVEAIKCGTVIDHIPAQIGFKLLTLFKLTATDQRITIGLNLPSGELGRKDLIK CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCEEE IENTFLTEQQANQLAMYAPKATVNRIDNYEVVRKLTLSLPDHIDGVLTCPNSNCISRSEP EHHHEECCHHCCEEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC VSSSFSVKSRDGDVHLKCRYCEKEFEHQVVLQAD CCCCCEEECCCCCEEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: carbamoyl phosphate; L-aspartate
Specific reaction: carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2674139 [H]