Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157368646

Identifier: 157368646

GI number: 157368646

Start: 446810

End: 447493

Strand: Direct

Name: 157368646

Synonym: Spro_0399

Alternate gene names: NA

Gene position: 446810-447493 (Clockwise)

Preceding gene: 157368644

Following gene: 157368647

Centisome position: 8.2

GC content: 38.01

Gene sequence:

>684_bases
ATGACCAAGATAGACAGTAGACAGTTTTCACCTTTGGATGAGAAGAATGCCCCAACCATTGAGTATTATCTGGACAATCC
CGTAATACCTGCTTGTGCTGGTATTACCCTTGTTAAAGATCTCAATCACCGCTTTGTTGCTTCTAACTTGTTGTTTAGTC
GGTTCTCTGGCGTAGATCCATATAGGTTGCCGACGCTTGATGACTCAGACATGCCATGGGCTGAAAGAGGCGATATTTAT
AGGGATCATGAGAAAGCGATCCTTGCAGGTGAGGTTTACAATGTTCTTGAACCCCTCCCAGGAGTCGTTCATGCTTTTTT
ACATACTTCTAAACAAGTTATATATGACAAGAATGGATTTCCTGCCGGGACCACAGCAACAGCTATTATTATGAATGGTC
ATATTGATTTTCATAATGTTACCGGTGCGTCAAAAGTGTTAAAAATATCATCATACAAAGATGTTAAACTCAGTGCTAAT
GAGGCTAAATTGCTGTTTTTTCTATTGAAAGGATTGAAAAGAAAACAAATATCAGAGCTTTTGAATATTAACCTTGCTAA
TTATGACTACTGCATGAGAAACCTGAAAGTCAAGTTCAATGTGAGTTCAAGTGTTCAGCTTATAGATGAGTGCATTAAGC
TAGGGTATCAGGATACATTTCCTTTTCAGATTTTTTTCAAATAG

Upstream 100 bases:

>100_bases
AGGGTTTTTAGGTTGCAGAAATATGTTACTTATAGAGTGAAAGTGAAGGATTGTGCTTTCGTTTTACAGTGAAAGACCGA
AAGTCCATGGGAGGACTTCC

Downstream 100 bases:

>100_bases
TTATCGTGAGCTTCTTGGTTCTATCCTATGACTTCTCATAGGATCTTAAATCCTTCTTTTTGACAGGTTAACAAAATTAA
TATTATTCTACTCCAACGCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIY
RDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSAN
EAKLLFFLLKGLKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK

Sequences:

>Translated_227_residues
MTKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIY
RDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSAN
EAKLLFFLLKGLKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK
>Mature_226_residues
TKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIYR
DHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSANE
AKLLFFLLKGLKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25686; Mature: 25555

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDP
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
YRLPTLDDSDMPWAERGDIYRDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGF
CCCCCCCCCCCCCHHCCCCEECCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCC
PAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSANEAKLLFFLLKGLKRKQISEL
CCCCCEEEEEEECCEEEECCCCHHHEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
LNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK
HCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure 
TKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDP
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
YRLPTLDDSDMPWAERGDIYRDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGF
CCCCCCCCCCCCCHHCCCCEECCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCC
PAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSANEAKLLFFLLKGLKRKQISEL
CCCCCEEEEEEECCEEEECCCCHHHEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
LNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK
HCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA