| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368646
Identifier: 157368646
GI number: 157368646
Start: 446810
End: 447493
Strand: Direct
Name: 157368646
Synonym: Spro_0399
Alternate gene names: NA
Gene position: 446810-447493 (Clockwise)
Preceding gene: 157368644
Following gene: 157368647
Centisome position: 8.2
GC content: 38.01
Gene sequence:
>684_bases ATGACCAAGATAGACAGTAGACAGTTTTCACCTTTGGATGAGAAGAATGCCCCAACCATTGAGTATTATCTGGACAATCC CGTAATACCTGCTTGTGCTGGTATTACCCTTGTTAAAGATCTCAATCACCGCTTTGTTGCTTCTAACTTGTTGTTTAGTC GGTTCTCTGGCGTAGATCCATATAGGTTGCCGACGCTTGATGACTCAGACATGCCATGGGCTGAAAGAGGCGATATTTAT AGGGATCATGAGAAAGCGATCCTTGCAGGTGAGGTTTACAATGTTCTTGAACCCCTCCCAGGAGTCGTTCATGCTTTTTT ACATACTTCTAAACAAGTTATATATGACAAGAATGGATTTCCTGCCGGGACCACAGCAACAGCTATTATTATGAATGGTC ATATTGATTTTCATAATGTTACCGGTGCGTCAAAAGTGTTAAAAATATCATCATACAAAGATGTTAAACTCAGTGCTAAT GAGGCTAAATTGCTGTTTTTTCTATTGAAAGGATTGAAAAGAAAACAAATATCAGAGCTTTTGAATATTAACCTTGCTAA TTATGACTACTGCATGAGAAACCTGAAAGTCAAGTTCAATGTGAGTTCAAGTGTTCAGCTTATAGATGAGTGCATTAAGC TAGGGTATCAGGATACATTTCCTTTTCAGATTTTTTTCAAATAG
Upstream 100 bases:
>100_bases AGGGTTTTTAGGTTGCAGAAATATGTTACTTATAGAGTGAAAGTGAAGGATTGTGCTTTCGTTTTACAGTGAAAGACCGA AAGTCCATGGGAGGACTTCC
Downstream 100 bases:
>100_bases TTATCGTGAGCTTCTTGGTTCTATCCTATGACTTCTCATAGGATCTTAAATCCTTCTTTTTGACAGGTTAACAAAATTAA TATTATTCTACTCCAACGCG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIY RDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSAN EAKLLFFLLKGLKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK
Sequences:
>Translated_227_residues MTKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIY RDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSAN EAKLLFFLLKGLKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK >Mature_226_residues TKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDPYRLPTLDDSDMPWAERGDIYR DHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGFPAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSANE AKLLFFLLKGLKRKQISELLNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25686; Mature: 25555
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDP CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC YRLPTLDDSDMPWAERGDIYRDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGF CCCCCCCCCCCCCHHCCCCEECCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCC PAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSANEAKLLFFLLKGLKRKQISEL CCCCCEEEEEEECCEEEECCCCHHHEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHH LNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK HCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEC >Mature Secondary Structure TKIDSRQFSPLDEKNAPTIEYYLDNPVIPACAGITLVKDLNHRFVASNLLFSRFSGVDP CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC YRLPTLDDSDMPWAERGDIYRDHEKAILAGEVYNVLEPLPGVVHAFLHTSKQVIYDKNGF CCCCCCCCCCCCCHHCCCCEECCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCC PAGTTATAIIMNGHIDFHNVTGASKVLKISSYKDVKLSANEAKLLFFLLKGLKRKQISEL CCCCCEEEEEEECCEEEECCCCHHHEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHH LNINLANYDYCMRNLKVKFNVSSSVQLIDECIKLGYQDTFPFQIFFK HCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA