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The map label for this gene is yubA [H]

Identifier: 157368644

GI number: 157368644

Start: 444600

End: 445523

Strand: Direct

Name: yubA [H]

Synonym: Spro_0397

Alternate gene names: 157368644

Gene position: 444600-445523 (Clockwise)

Preceding gene: 157368643

Following gene: 157368646

Centisome position: 8.16

GC content: 55.63

Gene sequence:

>924_bases
ATGTCTAACTGGTGCAAAAACCGTTTAGTTGTTACCGGCCAATCCGTGTTTGTCGACGAGCTGCAGCAGTGGGTGAATGG
CCATGTCGTGCCTGACTACCGCCATGCCATCCAGCAAAGCTGCAGGATGTTCCTGGCAGGCTGTGCCGGCATATTGAAGC
CGGCCACGGTAAAACCGGGCGTTTATGTCCCTTATCCGGGGTTGCTGGCCCATCCGGGGGTTACCTCGGCACAGAACCTG
GCTTTTGAACAATGGTTCGGTTTACTGAAAGCTGATGTGCCGTTGACAGGGGAGAATATTCGATTAGTCGAACGTCTCTA
CCGTCAGTCCGGTATCGATGCCGTAAAATGGGAGAACATCCCGGTCGTGGCGAAAGAACGGATTGCTGATGTGCTTGTCC
GGCAATATGCAGACTGGTTCGGACTCGTTGGTTTGGGGCCGGATATCGATGTTGGTAACTGCTGGGAGCGTCTGGGTACT
ATGCCCGAGTACACCGCCCCGTGCGATATGTTGATATTAATCCCAACGCGGCTGGCGACAGAACTGAATGGGGCGGGCAG
CTTGTTGCGTGACATTCCGACAACCGCTGAGCTTTACGGTCGGCAGTACGGTGTCGAATGGCCCTCTGGTCACAGTGTTG
GGTGTGTGCGAGACGGTATCAACACATTGACTGTGCACTTTGACTCCCCATGGTACCCGCCTGCCGGCGAGGTTATCGGG
ATACTGTCTGAGCAATTCAGTTGCCAGGTGGAACATTCCTGGAATATGGCTGATGCGCAACGCAGTGGTTACGATCGCTA
CGATCGCGGCGAGCATGTCGACGGCGGACGAATAGCGGCTAGGGTCGAGGTTGGTGAGGTGATCCACCTGGCCTACGCCG
ACAAGGATGCCGTGCCGTTGTCACCCAATTCAGCAGTTGGCTAA

Upstream 100 bases:

>100_bases
TTGTCCTGACCATCATGATGTAACACCTAACCCAACGGGGGAGACTTTCCCCCAATGGGGGATGTCTCTCCTTTTTTCTT
GAAAGAAGAGGAGAACTACC

Downstream 100 bases:

>100_bases
TTACCGAGTTTTGTTATTGCATTAACCTATGGCCACCGATGTTCGGTGGCTTTTTTTTCCAGTGGGGGAGTTCCCCATTG
CGGGTGGATAAATCGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSNWCKNRLVVTGQSVFVDELQQWVNGHVVPDYRHAIQQSCRMFLAGCAGILKPATVKPGVYVPYPGLLAHPGVTSAQNL
AFEQWFGLLKADVPLTGENIRLVERLYRQSGIDAVKWENIPVVAKERIADVLVRQYADWFGLVGLGPDIDVGNCWERLGT
MPEYTAPCDMLILIPTRLATELNGAGSLLRDIPTTAELYGRQYGVEWPSGHSVGCVRDGINTLTVHFDSPWYPPAGEVIG
ILSEQFSCQVEHSWNMADAQRSGYDRYDRGEHVDGGRIAARVEVGEVIHLAYADKDAVPLSPNSAVG

Sequences:

>Translated_307_residues
MSNWCKNRLVVTGQSVFVDELQQWVNGHVVPDYRHAIQQSCRMFLAGCAGILKPATVKPGVYVPYPGLLAHPGVTSAQNL
AFEQWFGLLKADVPLTGENIRLVERLYRQSGIDAVKWENIPVVAKERIADVLVRQYADWFGLVGLGPDIDVGNCWERLGT
MPEYTAPCDMLILIPTRLATELNGAGSLLRDIPTTAELYGRQYGVEWPSGHSVGCVRDGINTLTVHFDSPWYPPAGEVIG
ILSEQFSCQVEHSWNMADAQRSGYDRYDRGEHVDGGRIAARVEVGEVIHLAYADKDAVPLSPNSAVG
>Mature_306_residues
SNWCKNRLVVTGQSVFVDELQQWVNGHVVPDYRHAIQQSCRMFLAGCAGILKPATVKPGVYVPYPGLLAHPGVTSAQNLA
FEQWFGLLKADVPLTGENIRLVERLYRQSGIDAVKWENIPVVAKERIADVLVRQYADWFGLVGLGPDIDVGNCWERLGTM
PEYTAPCDMLILIPTRLATELNGAGSLLRDIPTTAELYGRQYGVEWPSGHSVGCVRDGINTLTVHFDSPWYPPAGEVIGI
LSEQFSCQVEHSWNMADAQRSGYDRYDRGEHVDGGRIAARVEVGEVIHLAYADKDAVPLSPNSAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023136
- InterPro:   IPR009694 [H]

Pfam domain/function: PF06924 DUF1281 [H]

EC number: NA

Molecular weight: Translated: 33832; Mature: 33701

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNWCKNRLVVTGQSVFVDELQQWVNGHVVPDYRHAIQQSCRMFLAGCAGILKPATVKPG
CCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VYVPYPGLLAHPGVTSAQNLAFEQWFGLLKADVPLTGENIRLVERLYRQSGIDAVKWENI
EEECCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCC
PVVAKERIADVLVRQYADWFGLVGLGPDIDVGNCWERLGTMPEYTAPCDMLILIPTRLAT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHH
ELNGAGSLLRDIPTTAELYGRQYGVEWPSGHSVGCVRDGINTLTVHFDSPWYPPAGEVIG
HHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEEECCCCCCCHHHHHH
ILSEQFSCQVEHSWNMADAQRSGYDRYDRGEHVDGGRIAARVEVGEVIHLAYADKDAVPL
HHHHHHEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCC
SPNSAVG
CCCCCCC
>Mature Secondary Structure 
SNWCKNRLVVTGQSVFVDELQQWVNGHVVPDYRHAIQQSCRMFLAGCAGILKPATVKPG
CCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VYVPYPGLLAHPGVTSAQNLAFEQWFGLLKADVPLTGENIRLVERLYRQSGIDAVKWENI
EEECCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCC
PVVAKERIADVLVRQYADWFGLVGLGPDIDVGNCWERLGTMPEYTAPCDMLILIPTRLAT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHH
ELNGAGSLLRDIPTTAELYGRQYGVEWPSGHSVGCVRDGINTLTVHFDSPWYPPAGEVIG
HHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEEECCCCCCCHHHHHH
ILSEQFSCQVEHSWNMADAQRSGYDRYDRGEHVDGGRIAARVEVGEVIHLAYADKDAVPL
HHHHHHEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCC
SPNSAVG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10366527 [H]