| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368647
Identifier: 157368647
GI number: 157368647
Start: 448292
End: 450004
Strand: Direct
Name: 157368647
Synonym: Spro_0400
Alternate gene names: NA
Gene position: 448292-450004 (Clockwise)
Preceding gene: 157368646
Following gene: 157368648
Centisome position: 8.23
GC content: 53.88
Gene sequence:
>1713_bases ATGCTGAAGGCCATCAAAGAGCTGCTTGTCGGGACCCGGGATATGCCGGCAAAGCCAACGGCAAGCACTTCAGGCTCACG GGGCCCTGCTGGCTACTATATGCCTGCGTCAGCAGAACAGCTTTTGAGCACGGCATCTCGTAAGCAGTGCTTACAGCAGT TATGGGAAAATTGTGCGCTTCCCAAAGACCTCTATGAACAATTCTATCTGCAGCCATTGAAGCAGCTCATGACGTTGATG CAGGTGTTGCCGGCTACGCCTCTGGGCGAGTATGCCAGGGAAGGGGGGTTGGTTGATGTGACCCTGCAGACGACAACGTA TGCGGTGCGCCTGGCCAAAGGGCACATGCTGCCTCCCGGGGCCGTACCGGAAGAACAATCGGCCCAGAATGTACAATGGA ATGTCGTGGTGTTTTACGCTGCGCTTTGGCACTACCTGCCGTTGTTGAGCCAGCTGCAGGGGGAGTTCCAAAGTGGCCGT GCCTGGTTACCCGGTCTGACAGTGCCGGGTGAACCTTACCGCTTTCGTTTCAGTGCGATTCTGCCAGTCCCGGCATTGAC GGCTAGTCAGAGTGCGATGATTGCGGCCCGGCTGCTGCCTGCGGAGGTCATCGACTGGCTATCAACACTGCCGGCGGCTG CACACTCGTTGATGACAATTGCTTCCCGACAGCCCAGTGCTTTATTACCTGTGATAGACGACATTATCCAGGAGGCGGCC AAGCTGGCGCGAGGCGATAGCCTGTCCATAGCATCCTCTCCGGCATCCATCTCCGACACATTGACAGTAGTCTTACCGTC GGTGGCGCTAACTACCGAAAATATTACCTCTTCAGTACCCGCAATTGATTTGCAAAGTGCAGTCAGTAGCACCAACCCTC CGCGTGTTGAGGAGCAGTTGCCGGCAGAGACATTAAATCAGACCGAAGAAAATGCAGCGTCAGCGCCGGAGGCATTACTA AGCTCTGCTCTGGATGTGTCGGTCAACGGTAAGGTTTTGGCTGAGATGGTCCCGGCGCCTGAAACGGTGGTCGGTATCGA GGAGGACATGCAGACCCTGTTGTCATTAATGGCGGTTGAGGTGTCTGCTCCGGTGAACCAGACAGAACAGGAGTTCGGGG ACGCCCCTCACGTAGATGAAGGCCCTATGCCTGCCGATAACCCTGTGCTTTCTGCTGAAGTGACTCAGGGAGCTGAGGCT GCCGAAATAAACCGGGAGTCAGACGCCATCGATGATATCGCTCCCGAAGTGGCATTTTCAACAACCGAATTTTGCCCCCC TCAAACTACTGACCTCGCTCCCTCGCAATCACAAAAGTTGGGCATTGAAGGCGATGGGGGCATAACTCCCGGAGAAGTCT TTTGGCGTTGGTTAGCTGAAGGACTCAATTCTAATGAGATCCCCATCAACTCCGTAGGCACACGGGTTCATCTTGTTTCT GGTTTTGTCTTCATCACCGTACCTGGGATTTTTTATTTGTACCTGAAACAGGCTGGCCTGGATGGTTCTCAACGAGAGGC CCTTCAAGAAGACTTTGAACGTCTGGAGAAACATCGTCGGGTCAAGGGTAAACGATTTTATTTTGCACACCTGTATGAAA CATCAGAGCGCACAGGGGCGTTTAAACGAACCAAAGGTTACCTCGTTAAAGCAAGTTTGCTCTATCGAGGGAAAAACCTG CCGGACGATAGTCCGGTACTGGTGATCCCTTGA
Upstream 100 bases:
>100_bases ATTGGTCTGGAAGCAAACTGGTAGTAAAGGCTTTTGCCGACACCGGTAAAGCGCCCACACTGGTGCGGTTCGCGGGTGAT GTTATCGCTGGAGGCCTGGC
Downstream 100 bases:
>100_bases TAGGGATTAATCCTGTCTTGCGACGACATCATGTTCGCAAGACTTCTATTTAAACTAGGGAGATATCATGCATAAATCGC GTGTTATGGATTGGGATACC
Product: relaxase
Products: NA
Alternate protein names: Helicase; Relaxase-Related Protein; Helicase/Relaxase
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MLKAIKELLVGTRDMPAKPTASTSGSRGPAGYYMPASAEQLLSTASRKQCLQQLWENCALPKDLYEQFYLQPLKQLMTLM QVLPATPLGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPGAVPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGR AWLPGLTVPGEPYRFRFSAILPVPALTASQSAMIAARLLPAEVIDWLSTLPAAAHSLMTIASRQPSALLPVIDDIIQEAA KLARGDSLSIASSPASISDTLTVVLPSVALTTENITSSVPAIDLQSAVSSTNPPRVEEQLPAETLNQTEENAASAPEALL SSALDVSVNGKVLAEMVPAPETVVGIEEDMQTLLSLMAVEVSAPVNQTEQEFGDAPHVDEGPMPADNPVLSAEVTQGAEA AEINRESDAIDDIAPEVAFSTTEFCPPQTTDLAPSQSQKLGIEGDGGITPGEVFWRWLAEGLNSNEIPINSVGTRVHLVS GFVFITVPGIFYLYLKQAGLDGSQREALQEDFERLEKHRRVKGKRFYFAHLYETSERTGAFKRTKGYLVKASLLYRGKNL PDDSPVLVIP
Sequences:
>Translated_570_residues MLKAIKELLVGTRDMPAKPTASTSGSRGPAGYYMPASAEQLLSTASRKQCLQQLWENCALPKDLYEQFYLQPLKQLMTLM QVLPATPLGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPGAVPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGR AWLPGLTVPGEPYRFRFSAILPVPALTASQSAMIAARLLPAEVIDWLSTLPAAAHSLMTIASRQPSALLPVIDDIIQEAA KLARGDSLSIASSPASISDTLTVVLPSVALTTENITSSVPAIDLQSAVSSTNPPRVEEQLPAETLNQTEENAASAPEALL SSALDVSVNGKVLAEMVPAPETVVGIEEDMQTLLSLMAVEVSAPVNQTEQEFGDAPHVDEGPMPADNPVLSAEVTQGAEA AEINRESDAIDDIAPEVAFSTTEFCPPQTTDLAPSQSQKLGIEGDGGITPGEVFWRWLAEGLNSNEIPINSVGTRVHLVS GFVFITVPGIFYLYLKQAGLDGSQREALQEDFERLEKHRRVKGKRFYFAHLYETSERTGAFKRTKGYLVKASLLYRGKNL PDDSPVLVIP >Mature_570_residues MLKAIKELLVGTRDMPAKPTASTSGSRGPAGYYMPASAEQLLSTASRKQCLQQLWENCALPKDLYEQFYLQPLKQLMTLM QVLPATPLGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPGAVPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGR AWLPGLTVPGEPYRFRFSAILPVPALTASQSAMIAARLLPAEVIDWLSTLPAAAHSLMTIASRQPSALLPVIDDIIQEAA KLARGDSLSIASSPASISDTLTVVLPSVALTTENITSSVPAIDLQSAVSSTNPPRVEEQLPAETLNQTEENAASAPEALL SSALDVSVNGKVLAEMVPAPETVVGIEEDMQTLLSLMAVEVSAPVNQTEQEFGDAPHVDEGPMPADNPVLSAEVTQGAEA AEINRESDAIDDIAPEVAFSTTEFCPPQTTDLAPSQSQKLGIEGDGGITPGEVFWRWLAEGLNSNEIPINSVGTRVHLVS GFVFITVPGIFYLYLKQAGLDGSQREALQEDFERLEKHRRVKGKRFYFAHLYETSERTGAFKRTKGYLVKASLLYRGKNL PDDSPVLVIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61631; Mature: 61631
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAIKELLVGTRDMPAKPTASTSGSRGPAGYYMPASAEQLLSTASRKQCLQQLWENCAL CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PKDLYEQFYLQPLKQLMTLMQVLPATPLGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPG CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCEEEEEECCCCCCCCC AVPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGRAWLPGLTVPGEPYRFRFSAI CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEE LPVPALTASQSAMIAARLLPAEVIDWLSTLPAAAHSLMTIASRQPSALLPVIDDIIQEAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KLARGDSLSIASSPASISDTLTVVLPSVALTTENITSSVPAIDLQSAVSSTNPPRVEEQL HHHCCCCCEECCCCCCCHHHHHHHHHHHHEEHHHHHCCCCCHHHHHHHCCCCCCCHHHHC PAETLNQTEENAASAPEALLSSALDVSVNGKVLAEMVPAPETVVGIEEDMQTLLSLMAVE CHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHH VSAPVNQTEQEFGDAPHVDEGPMPADNPVLSAEVTQGAEAAEINRESDAIDDIAPEVAFS HCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCCHHHHCCCCHHHHHHHCCHHHCC TTEFCPPQTTDLAPSQSQKLGIEGDGGITPGEVFWRWLAEGLNSNEIPINSVGTRVHLVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHH GFVFITVPGIFYLYLKQAGLDGSQREALQEDFERLEKHRRVKGKRFYFAHLYETSERTGA CCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCC FKRTKGYLVKASLLYRGKNLPDDSPVLVIP HHHCCCEEEEEEHHHCCCCCCCCCCEEEEC >Mature Secondary Structure MLKAIKELLVGTRDMPAKPTASTSGSRGPAGYYMPASAEQLLSTASRKQCLQQLWENCAL CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PKDLYEQFYLQPLKQLMTLMQVLPATPLGEYAREGGLVDVTLQTTTYAVRLAKGHMLPPG CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCEEEEEECCCCCCCCC AVPEEQSAQNVQWNVVVFYAALWHYLPLLSQLQGEFQSGRAWLPGLTVPGEPYRFRFSAI CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEE LPVPALTASQSAMIAARLLPAEVIDWLSTLPAAAHSLMTIASRQPSALLPVIDDIIQEAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KLARGDSLSIASSPASISDTLTVVLPSVALTTENITSSVPAIDLQSAVSSTNPPRVEEQL HHHCCCCCEECCCCCCCHHHHHHHHHHHHEEHHHHHCCCCCHHHHHHHCCCCCCCHHHHC PAETLNQTEENAASAPEALLSSALDVSVNGKVLAEMVPAPETVVGIEEDMQTLLSLMAVE CHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHH VSAPVNQTEQEFGDAPHVDEGPMPADNPVLSAEVTQGAEAAEINRESDAIDDIAPEVAFS HCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCCHHHHCCCCHHHHHHHCCHHHCC TTEFCPPQTTDLAPSQSQKLGIEGDGGITPGEVFWRWLAEGLNSNEIPINSVGTRVHLVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHH GFVFITVPGIFYLYLKQAGLDGSQREALQEDFERLEKHRRVKGKRFYFAHLYETSERTGA CCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCC FKRTKGYLVKASLLYRGKNLPDDSPVLVIP HHHCCCEEEEEEHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA