Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is livJ [H]
Identifier: 157368477
GI number: 157368477
Start: 257074
End: 258189
Strand: Direct
Name: livJ [H]
Synonym: Spro_0228
Alternate gene names: 157368477
Gene position: 257074-258189 (Clockwise)
Preceding gene: 157368473
Following gene: 157368478
Centisome position: 4.72
GC content: 56.45
Gene sequence:
>1116_bases ATGAAATTAACAAAAGGTAAGGCATTGTTGGCTGGCTGTATCGCGATGGCAATCGGGCATGCGGCAATGGCAAAAGACAT TAAGGTGGCGATCGTCGGGGCGATGTCCGGCCCGGTCGCACAGTATGGCGATATGGAGTTTACCGGTGCCCGTCAGGCAA TTGCCGATATCAATGCCAAGGGTGGCATCAAGGGCGATAAGTTGGTTGGTGTGGAATACGACGATGCCTGTGATCCGAAA CAGGCGGTAGCGGTGGCCAACAAGGTGATCAACGACGGTATCCGTTATGTGATCGGCCACCTGTGCTCGTCCTCGACGCA GCCGGCTTCCGATATTTATGAAGATGAAGGCGTGATCATGATTACCCCGGCGGCCACCAACGCCGATCTGACCACCCGTG GTTACAAGATGATCATGCGTACCACCGGCCTGGACTCCGATCAGGGCCCGACCGCAGCCAAGTACATCCTCAGTGAAATC AAACCCAAGCGCATTGCCGTGATCCACGACAAGCAGCAGTATGGCGAAGGCCTGGCACGCTCGGTACGCGACAGTCTGAA AAAACAGGGTACCGACGTGGTGATGTTTGAAGGTATCACCGCCGGCGATAAAGATTTCTCCACTCTGGTGGCACGCCTGA AGAAAGAGAACGTCGATTTTGTTTACTTCGGCGGCTACTACCCGGAAATGGGCCAAATCCTGCGCCAGGCCAAACAGGCC GGGCTGACCACCCGCTTTATGGGGCCAGAGGGGGTGGGCAACTCCTCACTGTCTAACATCGCCGGTGCGGCTTCCGAAGG CATGCTGGTGACCTTGCCGAAACGCTACGATCAGGTTCCAGCCAACAAACCTGTGGTCGATGCGCTGAAAGCCAAGAAAC TGGATCCGACCGGGCCGTTTGTCTGGACCACCTACGCCGCACTGCAATCTCTGACCACCGGGATGGAGCGCAGTGGCAGC CAAGAGCCGGCCGATATCGTCAAGGATTTGAAAACCGGCAAGCCGGTGGACACCGTGATGGGGCCGCTGAGCTGGGATGA CAAGGGCGATCTGAAAGGCTTCGAGTTCGGCGTGTTTGAATGGCATGCAGACGGCACATCAACACCAATCAAATAA
Upstream 100 bases:
>100_bases ACACCTAAATCATTATTACTTATGAATAAAAGCAGTAAATAAGGGTCAGGTGCAGGCAAACACAACAGGTACATTCACAA CGACAGATGGGGATTTGCGG
Downstream 100 bases:
>100_bases GCCATAATCATCAGGGTAGGACGCAGTTCTGCTGCGCCCGCGGGCCGGCTTGCCGGCTCCGTATCCCTTTACCTGAATGC TCTTCGCATTCAGGTTTCGC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-BP [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKLTKGKALLAGCIAMAIGHAAMAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGIKGDKLVGVEYDDACDPK QAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYILSEI KPKRIAVIHDKQQYGEGLARSVRDSLKKQGTDVVMFEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQA GLTTRFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPFVWTTYAALQSLTTGMERSGS QEPADIVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFEWHADGTSTPIK
Sequences:
>Translated_371_residues MKLTKGKALLAGCIAMAIGHAAMAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGIKGDKLVGVEYDDACDPK QAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYILSEI KPKRIAVIHDKQQYGEGLARSVRDSLKKQGTDVVMFEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQA GLTTRFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPFVWTTYAALQSLTTGMERSGS QEPADIVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFEWHADGTSTPIK >Mature_371_residues MKLTKGKALLAGCIAMAIGHAAMAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGIKGDKLVGVEYDDACDPK QAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYILSEI KPKRIAVIHDKQQYGEGLARSVRDSLKKQGTDVVMFEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQA GLTTRFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPFVWTTYAALQSLTTGMERSGS QEPADIVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFEWHADGTSTPIK
Specific function: This protein is a component of the leucine, isoleucine, valine, (threonine) transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=367, Percent_Identity=76.8392370572207, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI1789867, Length=365, Percent_Identity=75.8904109589041, Blast_Score=592, Evalue=1e-171,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39612; Mature: 39612
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTKGKALLAGCIAMAIGHAAMAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAK CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHCCCC GGIKGDKLVGVEYDDACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIM CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEE ITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYILSEIKPKRIAVIHDKQQYGEGLAR EECCCCCCCCCHHHHHEEHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHH SVRDSLKKQGTDVVMFEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQA HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC GLTTRFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPF CCEEEECCCCCCCCCHHHHHHCCCCCCEEEECCHHHCCCCCCCCHHHHHHHCCCCCCCCC VWTTYAALQSLTTGMERSGSQEPADIVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEEE WHADGTSTPIK EECCCCCCCCC >Mature Secondary Structure MKLTKGKALLAGCIAMAIGHAAMAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAK CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHCCCC GGIKGDKLVGVEYDDACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIM CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEE ITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYILSEIKPKRIAVIHDKQQYGEGLAR EECCCCCCCCCHHHHHEEHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHH SVRDSLKKQGTDVVMFEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQA HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC GLTTRFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPF CCEEEECCCCCCCCCHHHHHHCCCCCCEEEECCHHHCCCCCCCCHHHHHHHCCCCCCCCC VWTTYAALQSLTTGMERSGSQEPADIVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEEE WHADGTSTPIK EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA