Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157163745
Identifier: 157163745
GI number: 157163745
Start: 4532707
End: 4534656
Strand: Direct
Name: 157163745
Synonym: EcHS_A4527
Alternate gene names: NA
Gene position: 4532707-4534656 (Clockwise)
Preceding gene: 157163743
Following gene: 157163756
Centisome position: 97.61
GC content: 46.87
Gene sequence:
>1950_bases ATGTCCCAGCGTTATAACCTCTATCGTCGAACCAGCGGCATTTATGTTGTCCGCATTAGCGTTCCCCAACGTTTTCGTCG ATACGCAGGACAGTGTGAGATTCACACTTCAACAGGCACTCATGATCTTCATGAAGCAAAGCAGAAGTCCGCGCTCCTGT TGGCTGTCTGGTATCAGACCTTACAAGAGTATGAACAATTGGATTACCGAACTTTAAGTGACTGCGCCCCGCTGCTTGCT GGTGAGGGGATGATCTCGCTTTCTAACTTTGCTCAGTCAATCGAGTTGCCTATATCGCAATTGATTCGAGAGGTGATTAA TCGTAACCTCCCGGTATTCTGGCTGGCGACTGGTCAGTTCGGTTTCTATGTTGATGAATTTAATGCAGTAGAGCGGGAAC CCGGTGCAAAACGAGAAAAACAGTCTGATGATGAAAAGGATCAACCTAAAGAAGTCATCATTCTCAATAGCGCGTTTGAG CTGGGTATCGAGAGCTTCGCAAATGGTTATCTCCGCCCCTTCAATCCCCGGCATACTTTAGATTGTCTGTTGAGCGCTGG AGTATCCGAAGGAGAGGCTGCATTTCGAACTAGTGGTGATAACCAAAGTGGAGGTTGGTTCTTCGATTTACCCGGCGTAG ATATAACTGCTGATAGCCTCTTGATTAGCAAAGTTCATGCTGAAGGCCTTCGACTTACATGGCTGGTTAAGACCACGCCA CCAGCAGTTAGCATTCACCCTGCCGTGCCTCTTGTCGCCCCTGTTATCGCTAACGAATATGTTCACCGCAAACATTACAA TGAAAACTTGTCATGGCTTCGTGAAGAGTATTTGAAACATCGGCGTAAGGGCAAGGTATCAGAAGCGGCGCTCCGCGATA TTCGCTATTACTTCGATTTGATGATCGAAGTGATGGGGGATATTCAGTTGGAAGATTTCGACCGTGATTTCCTCCGGGCT TATGAGAGCAAGTTGCGCACAATTCCTGCTAACCGTAATTTGATGAAAGGTAAGCACGGGGTTAAGACGCTGGATGAGTT AATCGCCAAAGCGGCAGAATGTGGCGATAAACTGATGACAGAAGAGTCTGTCAAAAAGTATATCAACGGCCTTTATGGTG CAATGGAGTGGGCTGTTGATGACGGTAAGTTTCTGAAATCGCCATGCGACAACTTTTTCCCTCCCGATGACAAAGGTGAG CGAGAGCAGGATCACACTGACATATTTGAACCGCATGAAATTAAGGCAATTTTTTCGCAACCGTGGTTTGTGGCTGGAAC TGTTGAACGTAATGCGCAAGGGCGATTCCATCAATATTGCCCGTTTCACTATTGGGCGCCGTTGTTGGGCTTGATGACGG GGGCAAGGGTTAACGAGATTGCACAGTTAATGCTGGACGATGTTCTGGCAGATGACGGCGTTTATTACCTGAACCTTGAA AGCGATAGCGAAAACGGAAAGAAACTAAAAAACGCCCAATCCCGCCGCAAGATTCCGGTTCATTCTACGCTGATTGAACT CGGTTTTATCGAGTATGTGGATGCGTTGAAAGCTGCCGGGTATGACCGTCTTTTTCCCGAGCTTAAACCACATAAAACTA AAGGCTATGGTAGGCCGGTTTCCGCATGGTTCAATGAATCATTGCTTGCGGGTCGATTAAAACTTGAAAGAGACAGAAGC AAATCTTTCCACTCTTTCCGGCATTCTGTTTCAACTTTGCTTAAAGAGAAGGGTGTTAGTTCGGAACTGCGTGGGCAGCT ACTTGGGCATGTGCGCGGCAAAACAGAAACTGAAGTGCGATACAGCAAAGATTTAAAACCGGTTCACATGGTTGAGGTTG TCGAAAAGATTGATTTTTCTTTGCCCGAGATAGCGAGATTCAACATTCCTGATGGGCTGGATGCTGTAAGTGATGCGCTG CGAAGAAAGCGTGGCAAACAAACAGGTTGA
Upstream 100 bases:
>100_bases CCTTCGGCACCAAGACTCAATTAAATCCTTCTTTTTTAAGGATTTTTTGTTTCTAGACCTTAATATCGCGTTGCCCTACT ACAAAAGGGTATACGAGGCG
Downstream 100 bases:
>100_bases GTCAGTTACTATTCAGTTGAGTGATGCTCCTGAATGCGCTGGGACGCTTCCTAGCGCATTTTTTATTAAAGATCGTGGAT TTAATAGTGCCAAATTTGGA
Product: phage integrase family site specific recombinase
Products: NA
Alternate protein names: Integrase; Phage-Related Integrase; Phage Integrase; Phage Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Phage Integerase; Integrase/Resolvase Recombinase Protein; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; Phage Integrase-Like Protein; DNA-Binfing Protein
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSQRYNLYRRTSGIYVVRISVPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQTLQEYEQLDYRTLSDCAPLLA GEGMISLSNFAQSIELPISQLIREVINRNLPVFWLATGQFGFYVDEFNAVEREPGAKREKQSDDEKDQPKEVIILNSAFE LGIESFANGYLRPFNPRHTLDCLLSAGVSEGEAAFRTSGDNQSGGWFFDLPGVDITADSLLISKVHAEGLRLTWLVKTTP PAVSIHPAVPLVAPVIANEYVHRKHYNENLSWLREEYLKHRRKGKVSEAALRDIRYYFDLMIEVMGDIQLEDFDRDFLRA YESKLRTIPANRNLMKGKHGVKTLDELIAKAAECGDKLMTEESVKKYINGLYGAMEWAVDDGKFLKSPCDNFFPPDDKGE REQDHTDIFEPHEIKAIFSQPWFVAGTVERNAQGRFHQYCPFHYWAPLLGLMTGARVNEIAQLMLDDVLADDGVYYLNLE SDSENGKKLKNAQSRRKIPVHSTLIELGFIEYVDALKAAGYDRLFPELKPHKTKGYGRPVSAWFNESLLAGRLKLERDRS KSFHSFRHSVSTLLKEKGVSSELRGQLLGHVRGKTETEVRYSKDLKPVHMVEVVEKIDFSLPEIARFNIPDGLDAVSDAL RRKRGKQTG
Sequences:
>Translated_649_residues MSQRYNLYRRTSGIYVVRISVPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQTLQEYEQLDYRTLSDCAPLLA GEGMISLSNFAQSIELPISQLIREVINRNLPVFWLATGQFGFYVDEFNAVEREPGAKREKQSDDEKDQPKEVIILNSAFE LGIESFANGYLRPFNPRHTLDCLLSAGVSEGEAAFRTSGDNQSGGWFFDLPGVDITADSLLISKVHAEGLRLTWLVKTTP PAVSIHPAVPLVAPVIANEYVHRKHYNENLSWLREEYLKHRRKGKVSEAALRDIRYYFDLMIEVMGDIQLEDFDRDFLRA YESKLRTIPANRNLMKGKHGVKTLDELIAKAAECGDKLMTEESVKKYINGLYGAMEWAVDDGKFLKSPCDNFFPPDDKGE REQDHTDIFEPHEIKAIFSQPWFVAGTVERNAQGRFHQYCPFHYWAPLLGLMTGARVNEIAQLMLDDVLADDGVYYLNLE SDSENGKKLKNAQSRRKIPVHSTLIELGFIEYVDALKAAGYDRLFPELKPHKTKGYGRPVSAWFNESLLAGRLKLERDRS KSFHSFRHSVSTLLKEKGVSSELRGQLLGHVRGKTETEVRYSKDLKPVHMVEVVEKIDFSLPEIARFNIPDGLDAVSDAL RRKRGKQTG >Mature_648_residues SQRYNLYRRTSGIYVVRISVPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQTLQEYEQLDYRTLSDCAPLLAG EGMISLSNFAQSIELPISQLIREVINRNLPVFWLATGQFGFYVDEFNAVEREPGAKREKQSDDEKDQPKEVIILNSAFEL GIESFANGYLRPFNPRHTLDCLLSAGVSEGEAAFRTSGDNQSGGWFFDLPGVDITADSLLISKVHAEGLRLTWLVKTTPP AVSIHPAVPLVAPVIANEYVHRKHYNENLSWLREEYLKHRRKGKVSEAALRDIRYYFDLMIEVMGDIQLEDFDRDFLRAY ESKLRTIPANRNLMKGKHGVKTLDELIAKAAECGDKLMTEESVKKYINGLYGAMEWAVDDGKFLKSPCDNFFPPDDKGER EQDHTDIFEPHEIKAIFSQPWFVAGTVERNAQGRFHQYCPFHYWAPLLGLMTGARVNEIAQLMLDDVLADDGVYYLNLES DSENGKKLKNAQSRRKIPVHSTLIELGFIEYVDALKAAGYDRLFPELKPHKTKGYGRPVSAWFNESLLAGRLKLERDRSK SFHSFRHSVSTLLKEKGVSSELRGQLLGHVRGKTETEVRYSKDLKPVHMVEVVEKIDFSLPEIARFNIPDGLDAVSDALR RKRGKQTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73969; Mature: 73838
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRYNLYRRTSGIYVVRISVPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQT CCCCCCHHEECCCEEEEEECCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LQEYEQLDYRTLSDCAPLLAGEGMISLSNFAQSIELPISQLIREVINRNLPVFWLATGQF HHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCC GFYVDEFNAVEREPGAKREKQSDDEKDQPKEVIILNSAFELGIESFANGYLRPFNPRHTL EEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHH DCLLSAGVSEGEAAFRTSGDNQSGGWFFDLPGVDITADSLLISKVHAEGLRLTWLVKTTP HHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCC PAVSIHPAVPLVAPVIANEYVHRKHYNENLSWLREEYLKHRRKGKVSEAALRDIRYYFDL CCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MIEVMGDIQLEDFDRDFLRAYESKLRTIPANRNLMKGKHGVKTLDELIAKAAECGDKLMT HHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH EESVKKYINGLYGAMEWAVDDGKFLKSPCDNFFPPDDKGEREQDHTDIFEPHEIKAIFSQ HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC PWFVAGTVERNAQGRFHQYCPFHYWAPLLGLMTGARVNEIAQLMLDDVLADDGVYYLNLE CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEC SDSENGKKLKNAQSRRKIPVHSTLIELGFIEYVDALKAAGYDRLFPELKPHKTKGYGRPV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCH SAWFNESLLAGRLKLERDRSKSFHSFRHSVSTLLKEKGVSSELRGQLLGHVRGKTETEVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH YSKDLKPVHMVEVVEKIDFSLPEIARFNIPDGLDAVSDALRRKRGKQTG HHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQRYNLYRRTSGIYVVRISVPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQT CCCCCHHEECCCEEEEEECCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LQEYEQLDYRTLSDCAPLLAGEGMISLSNFAQSIELPISQLIREVINRNLPVFWLATGQF HHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCC GFYVDEFNAVEREPGAKREKQSDDEKDQPKEVIILNSAFELGIESFANGYLRPFNPRHTL EEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHH DCLLSAGVSEGEAAFRTSGDNQSGGWFFDLPGVDITADSLLISKVHAEGLRLTWLVKTTP HHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCC PAVSIHPAVPLVAPVIANEYVHRKHYNENLSWLREEYLKHRRKGKVSEAALRDIRYYFDL CCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MIEVMGDIQLEDFDRDFLRAYESKLRTIPANRNLMKGKHGVKTLDELIAKAAECGDKLMT HHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH EESVKKYINGLYGAMEWAVDDGKFLKSPCDNFFPPDDKGEREQDHTDIFEPHEIKAIFSQ HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC PWFVAGTVERNAQGRFHQYCPFHYWAPLLGLMTGARVNEIAQLMLDDVLADDGVYYLNLE CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEC SDSENGKKLKNAQSRRKIPVHSTLIELGFIEYVDALKAAGYDRLFPELKPHKTKGYGRPV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCH SAWFNESLLAGRLKLERDRSKSFHSFRHSVSTLLKEKGVSSELRGQLLGHVRGKTETEVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH YSKDLKPVHMVEVVEKIDFSLPEIARFNIPDGLDAVSDALRRKRGKQTG HHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA