Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is hflK
Identifier: 157163637
GI number: 157163637
Start: 4426774
End: 4428033
Strand: Direct
Name: hflK
Synonym: EcHS_A4416
Alternate gene names: 157163637
Gene position: 4426774-4428033 (Clockwise)
Preceding gene: 157163636
Following gene: 157163638
Centisome position: 95.33
GC content: 56.03
Gene sequence:
>1260_bases ATGGCGTGGAATCAGCCCGGTAATAACGGACAAGACCGCGACCCGTGGGGAAGCAGCAAACCTGGCGGCAACTCTGAGGG AAATGGAAACAAAGGCGGTCGCGATCAAGGGCCACCTGATTTAGATGATATCTTCCGCAAACTGAGCAAAAAGCTCGGTG GTCTGGGCGGCGGTAAAGGCACCGGATCTGGCGGTGGCAGTTCATCGCAAGGCCCGCGCCCGCAGCTTGGCGGTCGTGTC GTTACCATCGCAGCGGCAGCGATTGTCATTATCTGGGCGGCCAGTGGTTTCTATACCATTAAAGAAGCCGAACGCGGCGT GGTAACACGCTTTGGTAAATTCAGCCATCTGGTTGAGCCGGGTCTGAACTGGAAACCGACGTTTATCGACGAAGTCAAAC CGGTAAACGTGGAAGCCGTGCGTGAACTGGCCGCTTCCGGTGTGATGTTGACGTCGGACGAGAACGTAGTGCGCGTTGAG ATGAACGTGCAGTACCGCGTTACCAATCCGGAAAAATATCTGTATAGCGTGACCAGCCCGGATGACAGTCTGCGTCAGGC TACCGACAGCGCCCTGCGCGGGGTTATCGGTAAATACACCATGGACCGCATTCTGACGGAAGGTCGTACCGTGATTCGTA GCGATACTCAGCGCGAACTGGAAGAGACTATCCGTCCGTATGACATGGGCATCACTCTGCTGGACGTCAACTTCCAGGCT GCTCGTCCGCCGGAAGAAGTAAAAGCGGCGTTTGACGATGCGATTGCCGCGCGTGAAAACGAACAGCAATACATTCGTGA AGCAGAAGCGTATACCAACGAAGTTCAGCCGCGTGCGAACGGTCAGGCGCAACGTATCCTCGAAGAGGCGCGTGCGTACA AGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAA ATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGG TGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCA GCAATCTGCTGCGTTTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGAT ATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAA
Upstream 100 bases:
>100_bases GATTACCTGATCTAACGGCGTAGCGTCTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCAT AACAAATATGGAGCACAAAC
Downstream 100 bases:
>100_bases CGATGCGTAAGTCAGTTATCGCGATTATCATCATCGTGCTGGTAGTGCTTTACATGTCTGTCTTTGTCGTCAAAGAAGGT GAGCGCGGTATTACGCTGCG
Product: FtsH protease regulator HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRV VTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE MNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPE ITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGD IMDQRRANAQRNDYQRQGE
Sequences:
>Translated_419_residues MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRV VTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE MNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPE ITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGD IMDQRRANAQRNDYQRQGE >Mature_418_residues AWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVV TIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEM NVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQAA RPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEI TRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGDI MDQRRANAQRNDYQRQGE
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily
Homologues:
Organism=Escherichia coli, GI1790616, Length=419, Percent_Identity=100, Blast_Score=853, Evalue=0.0, Organism=Escherichia coli, GI1786697, Length=281, Percent_Identity=22.7758007117438, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HFLK_ECO57 (P0ABC8)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: F86113 - PIR: F91272 - RefSeq: NP_290804.1 - RefSeq: NP_313177.1 - ProteinModelPortal: P0ABC8 - SMR: P0ABC8 - EnsemblBacteria: EBESCT00000026194 - EnsemblBacteria: EBESCT00000060447 - GeneID: 914055 - GeneID: 959949 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5781 - KEGG: ecs:ECs5150 - GeneTree: EBGT00050000010264 - HOGENOM: HBG465357 - OMA: WNEPGGN - ProtClustDB: PRK10930 - BioCyc: ECOL83334:ECS5150-MONOMER - InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 - PANTHER: PTHR10264 - PRINTS: PR00721 - SMART: SM00244 - TIGRFAMs: TIGR01933
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N
EC number: NA
Molecular weight: Translated: 45545; Mature: 45414
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x193a7a9c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC TGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCHHHHHHHHHHHHHCC GLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSP CCCCCCCHHCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEEECHHHEEEEECCC DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCHHHCCEEEEEECCCC ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLK HCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHC GGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCH >Mature Secondary Structure AWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC TGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCHHHHHHHHHHHHHCC GLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSP CCCCCCCHHCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEEECHHHEEEEECCC DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCHHHCCEEEEEECCCC ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLK HCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHC GGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796