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The map label for this gene is ycfR

Identifier: 157162716

GI number: 157162716

Start: 3429126

End: 3429389

Strand: Direct

Name: ycfR

Synonym: EcHS_A3427

Alternate gene names: 157162716

Gene position: 3429126-3429389 (Clockwise)

Preceding gene: 157162715

Following gene: 157162721

Centisome position: 73.85

GC content: 48.48

Gene sequence:

>264_bases
ATGAAAATCAAAACCACTGTTGCTGCATTAAGCGTACTTTCTGTTCTCTCTTTCGGTGCATTCGCTGCCGACTCCATTGA
TGCTGCACAAGCACAAAATCGTGAAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTG
AAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCAC
GCTACGGCTGAACTGTACAAATAA

Upstream 100 bases:

>100_bases
AGCGCGGTATTAATTAGCTCAATAATTAGTGTATACTTGATTTTGTGATATGGGTCACGAAACAAAGGCCCAGCTAAAAG
ATTATGTCGAGGTAAAAATC

Downstream 100 bases:

>100_bases
ACCCTCATCGTCTTGTCCGACGATATTGCCCCCGGTTCGGGGGCTTTTTTTTGCGCTAATGACGAACATTAAAACGCAAA
TGCCCTTCCAGCTCTTCCTC

Product: protein YcfR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWH
ATAELYK

Sequences:

>Translated_87_residues
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWH
ATAELYK
>Mature_87_residues
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWH
ATAELYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family

Homologues:

Organism=Escherichia coli, GI87082233, Length=87, Percent_Identity=100, Blast_Score=176, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCN_ECOL6 (P64615)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_755859.1
- ProteinModelPortal:   P64615
- SMR:   P64615
- EnsemblBacteria:   EBESCT00000044696
- GeneID:   1040370
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c3993
- GeneTree:   EBGT00050000009057
- HOGENOM:   HBG677470
- OMA:   DMHEMLN
- ProtClustDB:   CLSK2751265
- InterPro:   IPR010854

Pfam domain/function: PF07338 DUF1471

EC number: NA

Molecular weight: Translated: 9196; Mature: 9196

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKA
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
EEKGATAYQITEARSGDTWHATAELYK
HHCCCCEEEEECCCCCCCEEHHHECCC
>Mature Secondary Structure
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKA
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
EEKGATAYQITEARSGDTWHATAELYK
HHCCCCEEEEECCCCCCCEEHHHECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157