Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is argR [H]
Identifier: 157162715
GI number: 157162715
Start: 3428291
End: 3428761
Strand: Direct
Name: argR [H]
Synonym: EcHS_A3426
Alternate gene names: 157162715
Gene position: 3428291-3428761 (Clockwise)
Preceding gene: 157162713
Following gene: 157162716
Centisome position: 73.83
GC content: 48.62
Gene sequence:
>471_bases ATGCGAAGCTCGGCTAAGCAAGAAGAACTAGTTAAAGCATTTAAAGCATTACTTAAAGAAGAGAAATTTAGCTCCCAGGG CGAAATCGTCGCCGCGTTGCAGGAGCAAGGCTTTGACAATATTAATCAGTCTAAAGTCTCGCGGATGTTGACCAAGTTTG GTGCTGTACGTACACGCAATGCCAAAATGGAAATGGTTTACTGCCTGCCAGCTGAACTGGGTGTACCAACCACCTCCAGT CCATTGAAGAATCTGGTGCTGGATATCGACTACAACGATGCAGTTGTCGTGATTCATACCAGCCCTGGCGCGGCGCAGTT AATTGCTCGCCTGCTGGACTCACTGGGCAAAGCAGAAGGTATTCTGGGCACCATCGCTGGCGATGACACCATCTTTACCA CCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAA
Upstream 100 bases:
>100_bases TTTCATAACATTATTTCAGCCTTCTTCAGGGCTGACTGTTTGCATAAAAATTCATCTGTATGCACAATAATGTTGTATCA ACCACCATATCGGGTGACTT
Downstream 100 bases:
>100_bases TCTCTGCCCCGTCGTTTCTGACGGCGGGGAAAATGTTGCTTATCCCTCTCAACCCCCTGCTTTCCCCTGCGATTAATTTA ACGAATAGTGCGTTTTACTG
Product: arginine repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSS PLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL
Sequences:
>Translated_156_residues MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSS PLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL >Mature_156_residues MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSS PLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
Organism=Escherichia coli, GI1789633, Length=156, Percent_Identity=100, Blast_Score=318, Evalue=1e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 16995; Mature: 16995
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRN CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG CCEEEEEEECHHCCCCCCCCCHHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHCC ILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRN CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG CCEEEEEEECHHCCCCCCCCCHHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHCC ILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA