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The map label for this gene is yqiH [H]

Identifier: 157162521

GI number: 157162521

Start: 3233379

End: 3234128

Strand: Direct

Name: yqiH [H]

Synonym: EcHS_A3223

Alternate gene names: 157162521

Gene position: 3233379-3234128 (Clockwise)

Preceding gene: 157162520

Following gene: 157162522

Centisome position: 69.63

GC content: 38.53

Gene sequence:

>750_bases
ATGCGCTACTTAAATACAAAGAATATCATTGCAGCAGGAGTATTACTCTCCTGCATGAACAGCATTGCCTGGGGTGCCAT
CATCCCGGATCGTACCCGTATAATAATGAATGAGTCAGATAAAGGCGAAGCATTAAAACTTACTAATCAAAGTAAAAAAC
TGCCCTATCTGGCCCAAACATGGATAGAAGATACGAAAGGCAATAAATCTCGTGACTTTATTGTTACGGTTCCTCCTATG
GTGCGTTTAAATCCCAATGAGCAAATTCAGATTAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAGGACAGAGA
AACTCTGTTCTATTTTAACGTGCGAGAAATACCGCCAAAAACAGATAAAAAAAATGTGATGCAAGTGACTATGCAGCACG
CTTTGAAATTATTCTGGCGGCCAAAAGCCATTGAGTTAGAAGACGATGGGGTAATGACTTACGAAAAAGTTGAAATCATC
CGTAGAAATGATGGTTCGATCCGCTTTAACAATAAAATGCCTTATCACGTTACGCTGGGTTATATCGGAACAAATGGGGT
CACGATGTTACCGCAAACGCAAAGCTTAATGGTCCTCCCTTTTAGCCATGCAGATACGCAGTTTAAAAATGTTCCATCAA
CTTTTCAGGTTGGTTATATCAATGATTTTGGTGGCTTAAGTTTTTATGAAATAAACTGCCCAACAGTGAATAATTCTTGT
AATGTTTCCGTAGCCAAACGAGATAAATAA

Upstream 100 bases:

>100_bases
CAAATCTTGTTTTATTCAACCCCCCCCCAATAGCAGCAACTTAACCACCGGAACGGTTATTTTACCGTGTATTAGCTAAA
ATTAATTCAGGATGAAACTA

Downstream 100 bases:

>100_bases
AATGCGCTACTTATTAACTGTAATTGCATTTATTATGGGTTTTAGTGCGTTACCTGTATGGGCGATGAACTGCTATGCTG
AACATGAAGGGGGGAATACC

Product: periplasmic pilus chaperone family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRYLNTKNIIAAGVLLSCMNSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKKLPYLAQTWIEDTKGNKSRDFIVTVPPM
VRLNPNEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVLPFSHADTQFKNVPSTFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKRDK

Sequences:

>Translated_249_residues
MRYLNTKNIIAAGVLLSCMNSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKKLPYLAQTWIEDTKGNKSRDFIVTVPPM
VRLNPNEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVLPFSHADTQFKNVPSTFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKRDK
>Mature_249_residues
MRYLNTKNIIAAGVLLSCMNSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKKLPYLAQTWIEDTKGNKSRDFIVTVPPM
VRLNPNEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVLPFSHADTQFKNVPSTFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKRDK

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI87082203, Length=249, Percent_Identity=95.5823293172691, Blast_Score=499, Evalue=1e-143,
Organism=Escherichia coli, GI1786936, Length=216, Percent_Identity=41.6666666666667, Blast_Score=182, Evalue=1e-47,
Organism=Escherichia coli, GI1788677, Length=228, Percent_Identity=38.1578947368421, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1787171, Length=246, Percent_Identity=32.1138211382114, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789532, Length=225, Percent_Identity=30.2222222222222, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790771, Length=225, Percent_Identity=29.7777777777778, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786333, Length=241, Percent_Identity=26.9709543568465, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786743, Length=223, Percent_Identity=29.5964125560538, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788428, Length=237, Percent_Identity=27.0042194092827, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081806, Length=128, Percent_Identity=31.25, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 28523; Mature: 28523

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLNTKNIIAAGVLLSCMNSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKKLPYLAQT
CCCCCCCHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCEEEECCCCCCCCHHHHH
WIEDTKGNKSRDFIVTVPPMVRLNPNEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPK
HHHHCCCCCCCCEEEECCCEEEECCCCEEEEEEECHHHHHCCCCCCCEEEEEEEEECCCC
TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLG
CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEECCCCEEECCCCCEEEEEE
YIGTNGVTMLPQTQSLMVLPFSHADTQFKNVPSTFQVGYINDFGGLSFYEINCPTVNNSC
EECCCCEEECCCCCCEEEEEECCCCCHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
NVSVAKRDK
CEEEEECCC
>Mature Secondary Structure
MRYLNTKNIIAAGVLLSCMNSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKKLPYLAQT
CCCCCCCHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCEEEECCCCCCCCHHHHH
WIEDTKGNKSRDFIVTVPPMVRLNPNEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPK
HHHHCCCCCCCCEEEECCCEEEECCCCEEEEEEECHHHHHCCCCCCCEEEEEEEEECCCC
TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLG
CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEECCCCEEECCCCCEEEEEE
YIGTNGVTMLPQTQSLMVLPFSHADTQFKNVPSTFQVGYINDFGGLSFYEINCPTVNNSC
EECCCCEEECCCCCCEEEEEECCCCCHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
NVSVAKRDK
CEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]