Click here to switch to the map view.

The map label for this gene is yqiG [H]

Identifier: 157162520

GI number: 157162520

Start: 3230856

End: 3233357

Strand: Direct

Name: yqiG [H]

Synonym: EcHS_A3222

Alternate gene names: 157162520

Gene position: 3230856-3233357 (Clockwise)

Preceding gene: 157162519

Following gene: 157162521

Centisome position: 69.58

GC content: 42.37

Gene sequence:

>2502_bases
ATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATCATCATTGG
TTGTGCGTCAGCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAAT
TTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCATCTG
GACCTGCAATGGGTATTAATTGATAACCAAACTGCAGTTTGTCTGACTCCAGAGCAATTAACATTATTAGGCTTTACTGA
TGAGATTATTGAAGAGGCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATC
TCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT
GAACTTTGGGATCATGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGA
TAATTCACAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGATTACCAGTACG
ATCAGTCATTTAACAATGGCAAAAGCCAGGCGAACAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGAA
ATTAATGCAAAACTAACTATAGGTCAATACGATACCGAATCGTCTATTTTCGACTCTTTCCATTTTTCTGGCATTTCGTT
GAAAAGTGATGAAAACATGTTACCGCCAGATCTACGTGGTTACGCACCGCAAATCACGGGGGTCGCACAAACGAATGCAA
AGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAACGTTCCTCCAGGCCCATTTTCTATTACCAATTTATTC
AATACATTACAGGGGCAACTGGACGTCAAGGTTGAAGAAGAGGACGGGCGCGTCACGCAATGGCAAGTTGCATCTAATAG
CATTCCTTATCTGACGCGTAAAGGGCAGATTCGCTACACTACTGCAATGGGGAAACCGACCAGCGTTGGCGGCGATTCCT
TACAACAGCCCTTCTTCTGGACCGGTGAATTCTCATGGGGTTGGCTGAACAACGTATCCCTGTATGGTGGTTCAGTATTA
ACAAACCGTGATTATCAATCCCTGGCTACCGGAGTTGGTTTTAACCTTAACTCGTTGGGCTCATTATCCTTTGATGTCAC
GCGATCTGATGCTCAGTTACATAATCAGAATAAAGAAACGGGTTATAGCTACCGTGCTAACTATTCAAAACGTTTTGAAT
CTACCGGTAGCCAGCTCACTTTCGCTGGCTACCGTTTCTCTGATAAAAACTTTGTGTCGATGAATGAATATATCAATGAC
ACTAACCATTACACGAATTATCAGAATGAAAAAGAGAGTTATATTGTCACGTTTAACCAGTATCTTGAATCATTGAGATT
AAATACATACGTAAGTCTGGCTCGTAATACTTACTGGGACGCCAGCAGTAATGTGAATTATTCATTATCACTTAGCCGCG
ATTTTGATATCGGCCCATTAAAAAACGTATCCACCTCACTAACATTTAGCCGAATAAACTGGGAAGATGACAACCAGGAT
CAACTGTACCTAAATATTTCAATTCCCTGGGGAACCAGTAGAACATTGAGCTATGGTATGCAACGAAATCAGGATAACAA
CATTTCGCATACTGCTTCGTGGTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGACG
AATTTAAAGATATGGAGGCGTCACTGCGCGCCAGTTATCAGCATAATACCGAGAACGGTCGTCTCTATCTCTCCGGTACA
TCACAGCGGGACAGCTACTATTCTCTGAATGCCAGTTGGAACGGTTCATTCACTGCAACTCGCCACGGCGCCGCTTTCCA
TGACTATAGTGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCGCTGAAGATATTCAGTTGAATAATAAACGCG
CGGTAACTAATCGTTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGCGTTGACACCCGA
AATCTGCCAGAAAATGTGGATATCGAAAACTCGGTTATCACCACCACCTTAACCGAGGGTGCTATTGGCTACGCCAAACT
TGATACCCGCAAAGGCTACCAAATCATGGGGATTATTCGCCTGGCAGATGGTAGTCACCCACCACTGGGGATTAGCGTAA
AAGATGAAACCAGCCACAAAGAATTAGGACTTGTTGCTGATGGCGGCTTTGTATACCTCAACGGCATTCAAGATGACAGC
AAAATTACTTTACACTGGGGTGACAAATCTTGTTTTATTCAACCCCCCCCCAATAGCAGCAACTTAACCACCGGAACGGT
TATTTTACCGTGTATTAGCTAA

Upstream 100 bases:

>100_bases
ACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCACCCGGCCACATCATTAACGG
ATTAATGATAAGTGGATCAG

Downstream 100 bases:

>100_bases
AATTAATTCAGGATGAAACTAATGCGCTACTTAAATACAAAGAATATCATTGCAGCAGGAGTATTACTCTCCTGCATGAA
CAGCATTGCCTGGGGTGCCA

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 833; Mature: 833

Protein sequence:

>833_residues
MYKKLKLTTISELIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHL
DLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPE
INAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFSITNLF
NTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVL
TNRDYQSLATGVGFNLNSLGSLSFDVTRSDAQLHNQNKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVSMNEYIND
TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRINWEDDNQD
QLYLNISIPWGTSRTLSYGMQRNQDNNISHTASWYDSSDRNNSWSVSASGDNDEFKDMEASLRASYQHNTENGRLYLSGT
SQRDSYYSLNASWNGSFTATRHGAAFHDYSGSADSRFMIDADGAEDIQLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR
NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGIIRLADGSHPPLGISVKDETSHKELGLVADGGFVYLNGIQDDS
KITLHWGDKSCFIQPPPNSSNLTTGTVILPCIS

Sequences:

>Translated_833_residues
MYKKLKLTTISELIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHL
DLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPE
INAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFSITNLF
NTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVL
TNRDYQSLATGVGFNLNSLGSLSFDVTRSDAQLHNQNKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVSMNEYIND
TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRINWEDDNQD
QLYLNISIPWGTSRTLSYGMQRNQDNNISHTASWYDSSDRNNSWSVSASGDNDEFKDMEASLRASYQHNTENGRLYLSGT
SQRDSYYSLNASWNGSFTATRHGAAFHDYSGSADSRFMIDADGAEDIQLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR
NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGIIRLADGSHPPLGISVKDETSHKELGLVADGGFVYLNGIQDDS
KITLHWGDKSCFIQPPPNSSNLTTGTVILPCIS
>Mature_833_residues
MYKKLKLTTISELIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHL
DLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPE
INAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFSITNLF
NTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVL
TNRDYQSLATGVGFNLNSLGSLSFDVTRSDAQLHNQNKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVSMNEYIND
TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRINWEDDNQD
QLYLNISIPWGTSRTLSYGMQRNQDNNISHTASWYDSSDRNNSWSVSASGDNDEFKDMEASLRASYQHNTENGRLYLSGT
SQRDSYYSLNASWNGSFTATRHGAAFHDYSGSADSRFMIDADGAEDIQLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR
NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGIIRLADGSHPPLGISVKDETSHKELGLVADGGFVYLNGIQDDS
KITLHWGDKSCFIQPPPNSSNLTTGTVILPCIS

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=819, Percent_Identity=39.8046398046398, Blast_Score=607, Evalue=1e-174,
Organism=Escherichia coli, GI1790772, Length=859, Percent_Identity=30.034924330617, Blast_Score=315, Evalue=8e-87,
Organism=Escherichia coli, GI1789533, Length=848, Percent_Identity=30.4245283018868, Blast_Score=286, Evalue=5e-78,
Organism=Escherichia coli, GI1786332, Length=853, Percent_Identity=28.253223915592, Blast_Score=280, Evalue=4e-76,
Organism=Escherichia coli, GI1787172, Length=812, Percent_Identity=27.9556650246305, Blast_Score=272, Evalue=8e-74,
Organism=Escherichia coli, GI1786744, Length=850, Percent_Identity=26.8235294117647, Blast_Score=252, Evalue=8e-68,
Organism=Escherichia coli, GI1788427, Length=837, Percent_Identity=27.2401433691756, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI1789610, Length=682, Percent_Identity=27.1260997067449, Blast_Score=122, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 93431; Mature: 93431

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKLKLTTISELIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQL
CCCEEEHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCHHHCCCCCCCCCHHEECCCCCC
PVGKYSLSTLINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEEAQQNLIDG
CCCCCHHHHHHCCCCCEEEEEEEEEEECCCEEEEECCCCEEEEECCHHHHHHHHHHHHCC
CYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWDHGIAGAFLDYNLYASH
CCCCCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEEECC
YAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPE
CCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
INAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQN
CCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECC
NRIIYQENVPPGPFSITNLFNTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYT
CEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEEEEE
TAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVLTNRDYQSLATGVGFNLNSLG
EECCCCCCCCCCCCCCCEEEECCCCCCEECCEEEECCEEEECCCHHHHHHCCCCCCCCCC
SLSFDVTRSDAQLHNQNKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVSMNEYIND
CEEEEEECCCHHHHCCCCCCCCEEECCCHHHHHCCCCEEEEEEEEECCCCEEEHHHHHCC
TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPL
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHEEEEHHCCCCCCCCCCEEEEEECCCCCCCCC
KNVSTSLTFSRINWEDDNQDQLYLNISIPWGTSRTLSYGMQRNQDNNISHTASWYDSSDR
CCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCEEEECCCCCCC
NNSWSVSASGDNDEFKDMEASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTAT
CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEE
RHGAAFHDYSGSADSRFMIDADGAEDIQLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR
ECCCEEECCCCCCCCEEEEECCCCCCEEECCCEEEEECCCCEECCCCHHHEEEEEEEECC
NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGIIRLADGSHPPLGISVKDETSHK
CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCC
ELGLVADGGFVYLNGIQDDSKITLHWGDKSCFIQPPPNSSNLTTGTVILPCIS
EEEEEECCCEEEEECCCCCCEEEEEECCCEEEEECCCCCCCEEECEEEEEECC
>Mature Secondary Structure
MYKKLKLTTISELIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQL
CCCEEEHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCHHHCCCCCCCCCHHEECCCCCC
PVGKYSLSTLINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEEAQQNLIDG
CCCCCHHHHHHCCCCCEEEEEEEEEEECCCEEEEECCCCEEEEECCHHHHHHHHHHHHCC
CYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWDHGIAGAFLDYNLYASH
CCCCCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEEECC
YAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPE
CCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
INAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQN
CCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECC
NRIIYQENVPPGPFSITNLFNTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYT
CEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEEEEE
TAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVLTNRDYQSLATGVGFNLNSLG
EECCCCCCCCCCCCCCCEEEECCCCCCEECCEEEECCEEEECCCHHHHHHCCCCCCCCCC
SLSFDVTRSDAQLHNQNKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVSMNEYIND
CEEEEEECCCHHHHCCCCCCCCEEECCCHHHHHCCCCEEEEEEEEECCCCEEEHHHHHCC
TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPL
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHEEEEHHCCCCCCCCCCEEEEEECCCCCCCCC
KNVSTSLTFSRINWEDDNQDQLYLNISIPWGTSRTLSYGMQRNQDNNISHTASWYDSSDR
CCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCEEEECCCCCCC
NNSWSVSASGDNDEFKDMEASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTAT
CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEE
RHGAAFHDYSGSADSRFMIDADGAEDIQLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR
ECCCEEECCCCCCCCEEEEECCCCCCEEECCCEEEEECCCCEECCCCHHHEEEEEEEECC
NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGIIRLADGSHPPLGISVKDETSHK
CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCC
ELGLVADGGFVYLNGIQDDSKITLHWGDKSCFIQPPPNSSNLTTGTVILPCIS
EEEEEECCCEEEEECCCCCCEEEEEECCCEEEEECCCCCCCEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]