Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is yqiI [H]
Identifier: 157162522
GI number: 157162522
Start: 3234130
End: 3235194
Strand: Direct
Name: yqiI [H]
Synonym: EcHS_A3224
Alternate gene names: 157162522
Gene position: 3234130-3235194 (Clockwise)
Preceding gene: 157162521
Following gene: 157162524
Centisome position: 69.65
GC content: 40.66
Gene sequence:
>1065_bases ATGCGCTACTTATTAACTGTAATTGCATTTATTATGGGTTTTAGTGCGTTACCTGTATGGGCGATGAACTGCTATGCTGA ACATGAAGGGGGGAATACCGTAGTCATAGGCTACGTACCAAGAATTGCTATCCCCAGCGATGGTAAAAAAGGTGATAAAA TCTGGCAAAGCAGTGAATATTTTATGAATGTCTTCTGTAATAATGCACTACCCGCCCCATCACCAGGAGAAGAATACCCA TCTGCATGGGTAAATATAATGATGTTGTTAGCATCAGGTCAGGACTTTTATAATCAAAACTCATATACTCTTGGTGTAAC CTATAATGGAGTCGATTATGATTCAACCTCCACACGAGCTATCGCAGCACCAGAGTGCATTGATGTTAAAGGCGCAGGGA TATACAGTAATACCTATAAAAACCCCGCTGTCTGTAGCGGTGGTCCTGAACCTCAATTGTCAGTAACTTTTCCAGTACGT GTACAGCTGTATATTAAGCTGGCTAAAAATGCTAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATCGCCCT AGAGTTTAAAGGTATGAGTGGCACAGGAACTATAGACACAGACAAAAATTTGACCTTCAGAATTCGTGGGTTAAATAATA TTCATGTCCTTGACTGCTTTGTTAATGTTGATCTGGAACCAGCTGATGGCGTTGTCGACTTTGGTAAAATAAATTCCCGA ACAATTAAAAATACCAGCGTGAGTGAGACGTTTAGCGTAGTCATGACCAAAGATCCGGGTGCGGCCTGTACTGAGCAGTT TAATATTTTAGGGAGTTTTTTCACTACGGATATTTTGAGTGATTATAGCCATCTGGATATAGGTAATGGTCTGCTATTGA AGATATTTCATAACGATGGAACAGCAACGGAATTTAACCGCTTCTCACAATTTGCTTCTTTTTCATCGTCTAGTGCGCCT TCGGTCACCGCACCATTCAGGGCAGAACTGAGTGCGAACCCGGCAGAAACGGTTGTTGAGGGACCGTTTAGTAAAGACGT AATCCTGAAAATCACCTATAACTAG
Upstream 100 bases:
>100_bases GGTTATATCAATGATTTTGGTGGCTTAAGTTTTTATGAAATAAACTGCCCAACAGTGAATAATTCTTGTAATGTTTCCGT AGCCAAACGAGATAAATAAA
Downstream 100 bases:
>100_bases TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCTCTAACTCCAGCTCTCTTGCCTGCATCATCT GTTGACAATACCAGGCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRYLLTVIAFIMGFSALPVWAMNCYAEHEGGNTVVIGYVPRIAIPSDGKKGDKIWQSSEYFMNVFCNNALPAPSPGEEYP SAWVNIMMLLASGQDFYNQNSYTLGVTYNGVDYDSTSTRAIAAPECIDVKGAGIYSNTYKNPAVCSGGPEPQLSVTFPVR VQLYIKLAKNANKVNKKLVLPDEYIALEFKGMSGTGTIDTDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSR TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDGTATEFNRFSQFASFSSSSAP SVTAPFRAELSANPAETVVEGPFSKDVILKITYN
Sequences:
>Translated_354_residues MRYLLTVIAFIMGFSALPVWAMNCYAEHEGGNTVVIGYVPRIAIPSDGKKGDKIWQSSEYFMNVFCNNALPAPSPGEEYP SAWVNIMMLLASGQDFYNQNSYTLGVTYNGVDYDSTSTRAIAAPECIDVKGAGIYSNTYKNPAVCSGGPEPQLSVTFPVR VQLYIKLAKNANKVNKKLVLPDEYIALEFKGMSGTGTIDTDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSR TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDGTATEFNRFSQFASFSSSSAP SVTAPFRAELSANPAETVVEGPFSKDVILKITYN >Mature_354_residues MRYLLTVIAFIMGFSALPVWAMNCYAEHEGGNTVVIGYVPRIAIPSDGKKGDKIWQSSEYFMNVFCNNALPAPSPGEEYP SAWVNIMMLLASGQDFYNQNSYTLGVTYNGVDYDSTSTRAIAAPECIDVKGAGIYSNTYKNPAVCSGGPEPQLSVTFPVR VQLYIKLAKNANKVNKKLVLPDEYIALEFKGMSGTGTIDTDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSR TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDGTATEFNRFSQFASFSSSSAP SVTAPFRAELSANPAETVVEGPFSKDVILKITYN
Specific function: May be involved in a fimbrial system chaperoned by yqiH and exported by yqiG [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ybgO [H]
Homologues:
Organism=Escherichia coli, GI1789427, Length=354, Percent_Identity=93.2203389830508, Blast_Score=655, Evalue=0.0, Organism=Escherichia coli, GI87081777, Length=343, Percent_Identity=35.8600583090379, Blast_Score=185, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38655; Mature: 38655
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLLTVIAFIMGFSALPVWAMNCYAEHEGGNTVVIGYVPRIAIPSDGKKGDKIWQSSEY CHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCEEEECCCCCCCCHHHCCCHH FMNVFCNNALPAPSPGEEYPSAWVNIMMLLASGQDFYNQNSYTLGVTYNGVDYDSTSTRA EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCCCCEE IAAPECIDVKGAGIYSNTYKNPAVCSGGPEPQLSVTFPVRVQLYIKLAKNANKVNKKLVL EECCCEEECCCCCEECCCCCCCCEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEC PDEYIALEFKGMSGTGTIDTDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSR CCCEEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCCCE TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDG EECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECCC TATEFNRFSQFASFSSSSAPSVTAPFRAELSANPAETVVEGPFSKDVILKITYN CCHHHHHHHHHHHCCCCCCCCEECCEEEECCCCCHHHHCCCCCCCCEEEEEEEC >Mature Secondary Structure MRYLLTVIAFIMGFSALPVWAMNCYAEHEGGNTVVIGYVPRIAIPSDGKKGDKIWQSSEY CHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCEEEECCCCCCCCHHHCCCHH FMNVFCNNALPAPSPGEEYPSAWVNIMMLLASGQDFYNQNSYTLGVTYNGVDYDSTSTRA EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCCCCEE IAAPECIDVKGAGIYSNTYKNPAVCSGGPEPQLSVTFPVRVQLYIKLAKNANKVNKKLVL EECCCEEECCCCCEECCCCCCCCEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEC PDEYIALEFKGMSGTGTIDTDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSR CCCEEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCCCE TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDG EECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECCC TATEFNRFSQFASFSSSSAPSVTAPFRAELSANPAETVVEGPFSKDVILKITYN CCHHHHHHHHHHHCCCCCCCCEECCEEEECCCCCHHHHCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]