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The map label for this gene is ygiL

Identifier: 157162519

GI number: 157162519

Start: 3230245

End: 3230796

Strand: Direct

Name: ygiL

Synonym: EcHS_A3221

Alternate gene names: 157162519

Gene position: 3230245-3230796 (Clockwise)

Preceding gene: 157162518

Following gene: 157162520

Centisome position: 69.56

GC content: 43.3

Gene sequence:

>552_bases
ATGTCTGCTTTTAAAAAGTCACTTCTTGTTGCTGGTGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCA
CGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGTAAATC
TGGGTGAAGTAGCAGATACCGTACTGAAAAGCGATCAGAAATCTTTGGCGGAACCTTTCACTATTCACCTGCAGGACTGC
ATGCTGAGTCAGGGTGGAACTACTTATTCAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGA
TCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGTGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCG
AAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATG
GAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAA

Upstream 100 bases:

>100_bases
AAAATCACAAAACAAAATATAATATTTTAATGATTGGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTTTACTTA
TCTTTATATAAAGGAATATT

Downstream 100 bases:

>100_bases
TCGCATTTGGCCGGGTTCACCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTA
ACCACAATAAGCGAATTGAT

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDC
MLSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARM
ESPSKDATPGNVYAQADYKIAYE

Sequences:

>Translated_183_residues
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDC
MLSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARM
ESPSKDATPGNVYAQADYKIAYE
>Mature_182_residues
SAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM
LSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARME
SPSKDATPGNVYAQADYKIAYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI1789422, Length=183, Percent_Identity=100, Blast_Score=375, Evalue=1e-106,
Organism=Escherichia coli, GI1786938, Length=187, Percent_Identity=37.9679144385027, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI1790769, Length=111, Percent_Identity=37.8378378378378, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGIL_ECOLI (P39834)

Other databases:

- EMBL:   U28377
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   M64472
- PIR:   A65092
- RefSeq:   AP_003593.1
- RefSeq:   NP_417515.1
- ProteinModelPortal:   P39834
- SMR:   P39834
- STRING:   P39834
- EnsemblBacteria:   EBESCT00000000102
- EnsemblBacteria:   EBESCT00000014529
- GeneID:   947522
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3011
- KEGG:   eco:b3043
- EchoBASE:   EB2266
- EcoGene:   EG12363
- eggNOG:   COG3539
- GeneTree:   EBGT00050000008610
- HOGENOM:   HBG701898
- OMA:   MESPGKD
- ProtClustDB:   PRK09733
- BioCyc:   EcoCyc:EG12363-MONOMER
- Genevestigator:   P39834
- GO:   GO:0009289
- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- Gene3D:   G3DSA:2.60.40.1090

Pfam domain/function: PF00419 Fimbrial; SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 19494; Mature: 19363

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADT
CCHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCEEEECCCCCCCCCCCEEEEHHHHHHH
VLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGA
HHHCCHHHHCCCEEEEEEHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCC
TGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKI
CCCEEEEEECCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEE
AYE
EEC
>Mature Secondary Structure 
SAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADT
CHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCEEEECCCCCCCCCCCEEEEHHHHHHH
VLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGA
HHHCCHHHHCCCEEEEEEHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCC
TGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKI
CCCEEEEEECCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEE
AYE
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1917833; 7984428