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The map label for this gene is ycbT

Identifier: 157160462

GI number: 157160462

Start: 1063422

End: 1064492

Strand: Direct

Name: ycbT

Synonym: EcHS_A1050

Alternate gene names: 157160462

Gene position: 1063422-1064492 (Clockwise)

Preceding gene: 157160461

Following gene: 157160463

Centisome position: 22.9

GC content: 48.27

Gene sequence:

>1071_bases
ATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGCTATGGTGCGCTCA
AACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGG
AGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGT
GATTGCGATAAAGACAATGTCAGAAGTGGCCGATGGGCATTCGCCGCGGATTCACCGTTAGTCTATTTAGGCGACAACTG
GTACAAAATTAATGACTATCTTGCCGCCAAAGTTTTATTGCAGGTTAAAGGCAGTTCTCCTACTGCGGTTCCTTTCGAAA
ACGTGGGCACAGGGGGGGATACCCGATGGCATATTTGCGACCCTGGCGGTCAACGTTTAGGTGGGCAGGGGGCAAGCGGT
AATAGCGGTAGCTTTTCCCTGAAAATATTGCAGCCGTTCGTTGGCTCGGTCGTCATTCCTCCTATGGCGCTGGCGCGATT
ATATGAATGCTACAACATACCCGCAGGTGATTCCTGCACGACTACAGGTACACCGGTTTTAGTGTATTACCTGTCTGGTA
CGATCAATTCACTTGGCTCATGTTCCGTCAATGCCGGAGAGACAATTGAAGTTGATTTAGGTGATGTCTTCGCTGCCAAT
TTCCGTGTTGTAGGGCATAAACCTCTTGGGGCCAGAACAGCAGAACTTGCAATTCCAGTCAGGTGTAACACGGGAAACGC
GGGATTAGTTAATGTCAACCTGAGTCTGACGGCAACCACAGACCCCAGCTATCCCCAGGCGATTAAGACGTCACGTCCTG
GCGTGGGCGTGGTGGTGACCGATAGCCAGAACAACATTATTTCCCCTGCTGGTGGAACATTACCGCTCTCTATTCCTGAT
GATGCAGACAGTATCGCGCGAATGAATGTCTATCCAGTCAGCACGACAGGTGTACCACCAGAAACCGGGCGATTTGAAGC
CACGGCAACGGTGAGAATAAATTTTGATTAA

Upstream 100 bases:

>100_bases
TAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCG
ATTACGCGAATGGATGCCAT

Downstream 100 bases:

>100_bases
CGCGTGAACGTATGAAGAAAAAAACGATATTTCAGTGCGTTATCTTGTTCTTTAGCATTCTTAACATCCATGTCGGGATG
GCTGGGCCTGAACAAGTTAG

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSC
DCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSIARMNVYPVSTTGVPPETGRFEATATVRINFD

Sequences:

>Translated_356_residues
MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSC
DCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSIARMNVYPVSTTGVPPETGRFEATATVRINFD
>Mature_356_residues
MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSC
DCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSIARMNVYPVSTTGVPPETGRFEATATVRINFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI1787173, Length=356, Percent_Identity=100, Blast_Score=731, Evalue=0.0,
Organism=Escherichia coli, GI145693100, Length=201, Percent_Identity=25.8706467661692, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCBT_ECOLI (P75858)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D64834
- RefSeq:   AP_001571.1
- RefSeq:   NP_415461.1
- ProteinModelPortal:   P75858
- STRING:   P75858
- EnsemblBacteria:   EBESCT00000000482
- EnsemblBacteria:   EBESCT00000015338
- GeneID:   947185
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0924
- KEGG:   eco:b0941
- EchoBASE:   EB3476
- EcoGene:   EG13712
- eggNOG:   COG3539
- GeneTree:   EBGT00050000008278
- HOGENOM:   HBG466893
- OMA:   RIVINST
- ProtClustDB:   CLSK879853
- BioCyc:   EcoCyc:G6483-MONOMER
- Genevestigator:   P75858
- GO:   GO:0009289
- InterPro:   IPR008966
- InterPro:   IPR000259
- Gene3D:   G3DSA:2.60.40.1090

Pfam domain/function: SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 37851; Mature: 37851

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHHHCCCCC
GVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLL
CEEEHHEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCEEEECHHEEEEEEE
QVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIP
EEECCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCEECC
PMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVT
EEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCEEEEEE
DSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD
CCCCCEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHHHCCCCC
GVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLL
CEEEHHEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCEEEECHHEEEEEEE
QVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIP
EEECCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCEECC
PMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVT
EEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCEEEEEE
DSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD
CCCCCEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503