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The map label for this gene is 156980321

Identifier: 156980321

GI number: 156980321

Start: 2128696

End: 2129712

Strand: Reverse

Name: 156980321

Synonym: SAHV_1990

Alternate gene names: NA

Gene position: 2129712-2128696 (Counterclockwise)

Preceding gene: 156980322

Following gene: 156980314

Centisome position: 73.94

GC content: 30.38

Gene sequence:

>1017_bases
ATGATTAAACAATTATACAAAAACATCACAATTTGTAGTTTAGCAATATCTACTGCATTAACTGTATTTCCGGCAACTTC
TTATGCAAAAATTAATTCTGAAATTAAAGCTGTTTCTGAGAAGAATCTTGATGGTGATACTAAAATGTATACACGTACAG
CTACAACAAGTGATAGTCAAAAAAATATTACTCAAAGCTTACAATTTAATTTCTTAACTGAACCTAATTATGATAAAGAA
ACAGTATTTATTAAAGCAAAAGGTACAATTGGTAGTGGTTTGAGAATTTTAGACCCAAATGGTTATTGGAATAGTACATT
AAGATGGCCTGGATCTTATTCAGTTTCAATTCAAAATGTTGATGACAACAACAATACAAATGTGACTGACTTTGCACCAA
AAAATCAGGATGAATCAAGAGAAGTTAAATATACGTATGGTTATAAAACAGGTGGAGATTTTTCGATTAATCGTGGAGGC
TTAACTGGAAATATTACAAAAGAGAGTAATTATTCAGAGACGATTAGTTATCAACAACCATCATATCGTACATTACTTGA
TCAATCTACGTCACATAAAGGTGTAGGTTGGAAAGTAGAAGCACATTTGATAAATAATATGGGACATGACCATACGAGAC
AATTAACTAATGATAGTGATAATAGAACTAAAAGTGAAATCTTTTCTTTAACACGAAATGGAAATTTATGGGCGAAAGAT
AATTTCACACCTAAAGACAAAATGCCTGTAACTGTGTCTGAAGGGTTTAATCCAGAATTTTTAGCTGTTATGTCACATGA
TAAAAAAGACAAAGGTAAATCACAATTTGTTGTTCATTATAAAAGATCAATGGATGAGTTTAAAATAGATTGGAATCGCC
ATGGTTTCTGGGGCTATTGGTCTGGTGAAAACCATGTAGATAAAAAAGAAGAAAAATTATCAGCATTATATGAAGTTGAT
TGGAAGACACATGATGTGAAGTTTGTAAAAGTACTTAATGATAATGAAAAGAAATAA

Upstream 100 bases:

>100_bases
TGAAGTTGATTGGAAAAATAAAACAGTTAAAGTCGTTGATAAATATTCTGATGACAATAAACCTTATAAAGAAGGATAAT
ATTGAAAGGGCGGATTACTA

Downstream 100 bases:

>100_bases
GTAATAAAAGTTGCCTGCTACATAGAATGTAGTAGGTAACTTTTATTTATATTTGAGTAGATAGATTTATTATGATGTGC
AGTGTATGAATCTTGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVD
WKTHDVKFVKVLNDNEKK

Sequences:

>Translated_338_residues
MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVD
WKTHDVKFVKVLNDNEKK
>Mature_338_residues
MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVD
WKTHDVKFVKVLNDNEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aerolysin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003963
- InterPro:   IPR001340
- InterPro:   IPR016183 [H]

Pfam domain/function: PF07968 Leukocidin [H]

EC number: NA

Molecular weight: Translated: 38662; Mature: 38662

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQ
CHHHHHHCCCCEEHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH
KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
HHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCEEEEEEEC
DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
CCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCEECCCCC
SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
CHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHEEECCCCEEECC
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE
SGENHVDKKEEKLSALYEVDWKTHDVKFVKVLNDNEKK
CCCCCCCHHHHHHHHHEEECCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQ
CHHHHHHCCCCEEHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH
KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
HHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCEEEEEEEC
DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
CCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCEECCCCC
SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
CHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHEEECCCCEEECC
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE
SGENHVDKKEEKLSALYEVDWKTHDVKFVKVLNDNEKK
CCCCCCCHHHHHHHHHEEECCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA