Click here to switch to the map view.

The map label for this gene is 156980314

Identifier: 156980314

GI number: 156980314

Start: 2123629

End: 2123871

Strand: Reverse

Name: 156980314

Synonym: SAHV_1983

Alternate gene names: NA

Gene position: 2123871-2123629 (Counterclockwise)

Preceding gene: 156980321

Following gene: 156980313

Centisome position: 73.74

GC content: 30.86

Gene sequence:

>243_bases
ATGATATACAATTTCGATTATAGTTTGCTGTACGAAAGAATGGCAGAGTATAGATATAGCCAAAGTTCTTTAGCGAACGC
AATCCCTATTTCAAGGACATCTATTAATCACAAGTTGCAAGGAAAAAATTTATTCACACAATGGGAAATAAAACGAATCT
GTGAATTATTAGAAATCCCACCAACAAAAGTAGGTAGATATTTTTTTGAACAAAATGTACAGAAAACTGTACAAACATCT
TAA

Upstream 100 bases:

>100_bases
AAATGTTGTACAGAAAAATGTATTTTATGTGTTGACTTATTTAAACAAAGGTGTTTTAATTGATTTGTACAGAAAACCGA
ACAAGAAGGGAGGTGAGTTT

Downstream 100 bases:

>100_bases
TAGGAGGGACACAATGGAACAAATCACGTTAACCAAAGAAGAGTGTGTCGAACAATGCATCAATAAAGACTTAAAACTTT
TAGATTATCGAGTTCAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MIYNFDYSLLYERMAEYRYSQSSLANAIPISRTSINHKLQGKNLFTQWEIKRICELLEIPPTKVGRYFFEQNVQKTVQTS

Sequences:

>Translated_80_residues
MIYNFDYSLLYERMAEYRYSQSSLANAIPISRTSINHKLQGKNLFTQWEIKRICELLEIPPTKVGRYFFEQNVQKTVQTS
>Mature_80_residues
MIYNFDYSLLYERMAEYRYSQSSLANAIPISRTSINHKLQGKNLFTQWEIKRICELLEIPPTKVGRYFFEQNVQKTVQTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9541; Mature: 9541

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYNFDYSLLYERMAEYRYSQSSLANAIPISRTSINHKLQGKNLFTQWEIKRICELLEIP
CEECCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PTKVGRYFFEQNVQKTVQTS
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYNFDYSLLYERMAEYRYSQSSLANAIPISRTSINHKLQGKNLFTQWEIKRICELLEIP
CEECCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PTKVGRYFFEQNVQKTVQTS
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA