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The map label for this gene is 156980322

Identifier: 156980322

GI number: 156980322

Start: 2129734

End: 2130789

Strand: Reverse

Name: 156980322

Synonym: SAHV_1991

Alternate gene names: NA

Gene position: 2130789-2129734 (Counterclockwise)

Preceding gene: 156980326

Following gene: 156980321

Centisome position: 73.98

GC content: 29.83

Gene sequence:

>1056_bases
ATGAAAAATAAAAAACGTGTTTTAATAGCGTCATCATTATCATGTGCAATTTTATTGTTATCAGCAGCAACGACTCAAGC
AAATTCAGCTCATAAAGACTCGCAAGATCAAAATAAGAAAGAACATGTTGATAAGTCTCAACAAAAAGACAAACGTAATG
TTACTAATAAAGATAAAAATTCAACAGTACCTGATGATATTGGGAAAAACGGTAAAATCACAAAACGAACTGAAACAGTA
TATGATGAGAAAACAAATATACTCCAAAATTTACAATTCGACTTTATCGATGATCCAACTTATGACAAGAATGTATTACT
TGTTAAAAAACAAGGCTCAATTCATTCAAATTTAAAGTTTGAATCTCATAAAGAAGAAAAAAATTCAAATTGGTTAAAGT
ATCCAAGTGAGTACCATGTAGATTTTCAAGTAAAAAGAAATCGTAAAACTGAAATATTAGACCAATTGCCGAAAAATAAA
ATTTCAACTGCGAAAGTAGACAGTACATTTTCATATAGCTCAGGTGGTAAATTCGATTCAACGAAAGGTATTGGACGAAC
TTCATCAAATAGCTACTCCAAAACGATTAGTTATAATCAGCAAAATTATGACACAATTGCCAGCGGTAAAAATAATAACT
GGCATGTACACTGGTCAGTTATTGCGAATGACTTGAAGTATGGTGGAGAAGTGAAAAATAGAAATGATGAATTATTATTC
TATAGAAATACGAGAATTGCTACTGTAGAAAACCCTGAACTAAGCTTTGCTTCAAAATATAGATACCCAGCATTAGTAAG
AAGTGGCTTTAATCCAGAATTTTTAACTTATTTATCTAATGAAAAGTCAAATGAGAAAACGCAATTTGAAGTAACATACA
CACGAAATCAAGATATTTTGAAAAACAGACCTGGAATACATTATGCACCTCCAATTTTAGAAAAAAATAAAGATGGTCAA
AGGTTAATTGTCACTTATGAAGTTGATTGGAAAAATAAAACAGTTAAAGTCGTTGATAAATATTCTGATGACAATAAACC
TTATAAAGAAGGATAA

Upstream 100 bases:

>100_bases
ATTTAATAAATAGTTAAATATATATTCTCTATTTTTGTGATATTATTCACATGTCGATACATATCAACAAATATCAATCA
TACGAAAGAAGGTTATAACA

Downstream 100 bases:

>100_bases
TATTGAAAGGGCGGATTACTAATGATTAAACAATTATACAAAAACATCACAATTTGTAGTTTAGCAATATCTACTGCATT
AACTGTATTTCCGGCAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETV
YDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQ
RLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG

Sequences:

>Translated_351_residues
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETV
YDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQ
RLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
>Mature_351_residues
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETV
YDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQ
RLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aerolysin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001340
- InterPro:   IPR016183 [H]

Pfam domain/function: PF07968 Leukocidin [H]

EC number: NA

Molecular weight: Translated: 40462; Mature: 40462

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN
CCCCCEEEEECCCCEEEHEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
STVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKF
CCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCCCCCCC
ESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDS
CCCHHCCCCCCEECCCEEEEEEEECCCCHHHHHHHCCCCCCCEEECCCCEECCCCCCCCC
TKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
CCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCEEEEEEEEECHHHCCCCCCCCCCCEEE
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDIL
EECCEEEEECCCCCCHHHHCCCHHHHHCCCCHHHHHEECCCCCCCCEEEEEEEECCCHHH
KNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
HCCCCCCCCCCHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN
CCCCCEEEEECCCCEEEHEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
STVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKF
CCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCCCCCCC
ESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDS
CCCHHCCCCCCEECCCEEEEEEEECCCCHHHHHHHCCCCCCCEEECCCCEECCCCCCCCC
TKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
CCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCEEEEEEEEECHHHCCCCCCCCCCCEEE
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDIL
EECCEEEEECCCCCCHHHHCCCHHHHHCCCCHHHHHEECCCCCCCCEEEEEEEECCCHHH
KNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
HCCCCCCCCCCHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA