| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937326
Identifier: 156937326
GI number: 156937326
Start: 476048
End: 476911
Strand: Reverse
Name: 156937326
Synonym: Igni_0533
Alternate gene names: NA
Gene position: 476911-476048 (Counterclockwise)
Preceding gene: 156937332
Following gene: 156937325
Centisome position: 36.76
GC content: 57.41
Gene sequence:
>864_bases ATGGACATTATAGGTCTGTTGTTTTGGCTACTCTTGTTGACGATGATAACAGAGCCAGTTCTGGAATACCAGCGTATAAA GAACGCTAGAATGAACGTTCTGAGGAGGATAGAAGAGAAGTACGGCTACCGTATCATCACGTTGATACACCGCCAAGAGA GGGTGGGCTTCTTCGGCATACCGTTCTACCGCTTCATAGACGTTGAGGACAGCGAAGCGGTCATCAGGGCTATCCACAAC ACTCCCAAGGACGTACCCATAATGATGATACTCCACACGCCAGGCGGAATGGTGCTGGCAGCATCCCAGATAGCTAAGGC GCTCCACGACCACCCCGCCAAGAAGGTCGCAGTGGTGCCACACTACGCCATGAGCGGTGGTACGCTGATAGCCTTAGCGG CCGACGAGATATGGATGGGCCCCGCGGCCGCCTTAGGACCGCTGGACCCCCAAGTGCCGGTGGCCACCCCGGCCGGCCCG ATGCACGTGCCCTCGCCGAGCGTGGTCAAGGTAGCTGAGGAGAAGGGCAAGGAAGCTAATGAATACTTCTTGGTTCACGC GGACGTTGCCAAGAAAGCGCTGAACGAGATGTTAGAGTTCGTAACATACATACTCAAGGACAAGGTCGGCGAGGAGAAGG CGAGGGAGATAGCGGAGGAGCTGGTAACCGGCAAGTACACCCACGACCACCCCTTGTTCTACGAGGACTTGGTGAAGCTA GGGTTACCGGTGAAGAAGGAGGTGCCCGAGGAGGTCTGGGCCCTCATGGAGCTCTACCCGCAAGCCCAGCCCCAGAGGCC GGGCGTGGAATACTTGCCCGTCCCGGCGGTCCCCCAAAAGAGGGGGCTCGGCGATAAAGCCTAA
Upstream 100 bases:
>100_bases ACTGAAAGCGCGAAGACCAAGTGCCTAAATTTCACGCACCCCAAAGCCCGCGCCCAGCTTCAAAAGCCTCCGAGGAGTTT TTCTCTTAGGGCTTCAAACC
Downstream 100 bases:
>100_bases CCCTCACACGACTTTTTAGGAGCGACGACATGATCGAGATAGACGGCTCCTTCGGCGAGGGAGGTGGCCAAATACTTAGG ACCTCCGTGGCACTCTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MDIIGLLFWLLLLTMITEPVLEYQRIKNARMNVLRRIEEKYGYRIITLIHRQERVGFFGIPFYRFIDVEDSEAVIRAIHN TPKDVPIMMILHTPGGMVLAASQIAKALHDHPAKKVAVVPHYAMSGGTLIALAADEIWMGPAAALGPLDPQVPVATPAGP MHVPSPSVVKVAEEKGKEANEYFLVHADVAKKALNEMLEFVTYILKDKVGEEKAREIAEELVTGKYTHDHPLFYEDLVKL GLPVKKEVPEEVWALMELYPQAQPQRPGVEYLPVPAVPQKRGLGDKA
Sequences:
>Translated_287_residues MDIIGLLFWLLLLTMITEPVLEYQRIKNARMNVLRRIEEKYGYRIITLIHRQERVGFFGIPFYRFIDVEDSEAVIRAIHN TPKDVPIMMILHTPGGMVLAASQIAKALHDHPAKKVAVVPHYAMSGGTLIALAADEIWMGPAAALGPLDPQVPVATPAGP MHVPSPSVVKVAEEKGKEANEYFLVHADVAKKALNEMLEFVTYILKDKVGEEKAREIAEELVTGKYTHDHPLFYEDLVKL GLPVKKEVPEEVWALMELYPQAQPQRPGVEYLPVPAVPQKRGLGDKA >Mature_287_residues MDIIGLLFWLLLLTMITEPVLEYQRIKNARMNVLRRIEEKYGYRIITLIHRQERVGFFGIPFYRFIDVEDSEAVIRAIHN TPKDVPIMMILHTPGGMVLAASQIAKALHDHPAKKVAVVPHYAMSGGTLIALAADEIWMGPAAALGPLDPQVPVATPAGP MHVPSPSVVKVAEEKGKEANEYFLVHADVAKKALNEMLEFVTYILKDKVGEEKAREIAEELVTGKYTHDHPLFYEDLVKL GLPVKKEVPEEVWALMELYPQAQPQRPGVEYLPVPAVPQKRGLGDKA
Specific function: Unknown
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1495 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002825 [H]
Pfam domain/function: PF01972 DUF114 [H]
EC number: NA
Molecular weight: Translated: 32079; Mature: 32079
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIIGLLFWLLLLTMITEPVLEYQRIKNARMNVLRRIEEKYGYRIITLIHRQERVGFFGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCEECC PFYRFIDVEDSEAVIRAIHNTPKDVPIMMILHTPGGMVLAASQIAKALHDHPAKKVAVVP CCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCCEEEEEC HYAMSGGTLIALAADEIWMGPAAALGPLDPQVPVATPAGPMHVPSPSVVKVAEEKGKEAN CEECCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC EYFLVHADVAKKALNEMLEFVTYILKDKVGEEKAREIAEELVTGKYTHDHPLFYEDLVKL EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH GLPVKKEVPEEVWALMELYPQAQPQRPGVEYLPVPAVPQKRGLGDKA CCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDIIGLLFWLLLLTMITEPVLEYQRIKNARMNVLRRIEEKYGYRIITLIHRQERVGFFGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCEECC PFYRFIDVEDSEAVIRAIHNTPKDVPIMMILHTPGGMVLAASQIAKALHDHPAKKVAVVP CCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCCEEEEEC HYAMSGGTLIALAADEIWMGPAAALGPLDPQVPVATPAGPMHVPSPSVVKVAEEKGKEAN CEECCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC EYFLVHADVAKKALNEMLEFVTYILKDKVGEEKAREIAEELVTGKYTHDHPLFYEDLVKL EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH GLPVKKEVPEEVWALMELYPQAQPQRPGVEYLPVPAVPQKRGLGDKA CCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]