Click here to switch to the map view.

The map label for this gene is 156937332

Identifier: 156937332

GI number: 156937332

Start: 482150

End: 483844

Strand: Reverse

Name: 156937332

Synonym: Igni_0539

Alternate gene names: NA

Gene position: 483844-482150 (Counterclockwise)

Preceding gene: 156937333

Following gene: 156937326

Centisome position: 37.29

GC content: 55.34

Gene sequence:

>1695_bases
TTGAACAGAAACTTATTGATCTTGATAGTAGCCGTAACGGCAACCTTCGTAATATCCTTCGTCGCCTTCAGCACGCTGAA
GGTAGAACCCGAGGGCCCTCTGAAGGACGTCGTCGAGAAAATACTCGTAAACTTTAAGATGAAACATTGCGAGTGGATAA
ACGTAATAAGGGAGCACGGGTTCGACTATCACAAAGCCTTAGAGGAGTGTGAGGTCGACCTAAACTCCACCGTGGTTGCC
TTCAGCGAGGCGCTGGCCACGGCGTCATTCGTAGCCGCGATACTCGGGACGCTGATGTTCTGGAACAAGAGGCTCAGCTT
CGTGATGATCGGAGTCGCGCTCTTGTTGTTCCTGGGGACCGCCCCCTTCGAGATGATACTGGAACACATGGAGCTGGGAT
TGATACTGTTCTTGATATCAATGATGATCATAGTAGAGTACTTAAACGAGAGCGGGGTCTTGGGGTGGATAACCGTCAAG
CTGGTGAAGGCCAGCAAGTTCCAACCGCTCCGCTTCGTGGCGATACTCGGGTTCTTGAGCTGGATAATGGCGGCCTTAGT
GGACGAAGTGACGAGCATAGTGTTCGTAACTAGGGTAGTTATATCCATAGCCTCCATGCTCGAGCTGAACCCCATCCCAC
TCGTGATATACTCGGTTATGGCAACCAACATAGGCTCTTCGGCCACCATGATAGGGAACCCCATAGGCATTTACATAGCC
CTCCAGTCCGGCAAGAGCTTCGAGGACTTCTTGGAGTGGGCCACCCCCGGGAGCCTCTTAGCGTTGCTCACGCTCCTTCC
AATAGCCTTAGTCTGGCTCTCCAAGACTGGTCTCTTCAAGAAGCTGAGGGAGAAAGGGTCCATGATAAGCTTGGATGAGT
GGAGCGCCTTGGGCATAAGCTCAGAGCTCTACGAGGCCTACAAGTCCGGCAAGCTGACGGGTAAGGAGGCGGAAGAAGTG
GAGGCCGCGCTCAAGAGGTTCAAGAGGGGTTGGGCCTTCTTCATAGCCGTGCTCCTCCTAATCGCCTTCCACACCCCCTT
GTCGGGGGCCTTGAACCAGTTCTTAGCTTACTTGTACGCAGCCATGAGCGTCGGGTCGGAGGTCAGCATCCACGCGGAGG
TGCCCCCGGACGCCTTGCTCGTCTTCAGCCCGGTCGTGGTGGCGGCGATCTTGATGTTCACCCACGAGGAGCCGAGGAGG
TTGGTAGAGAAGGGCGTGGAGTGGTGGACCTTACTCTTCTTCATGTTCTTGTTCGCCATAGCTTCGGCGCTCAGCTACAC
GGGCGTCACCGACAAGATGGCCTACTCATTGGTGCAGATGGTGGGAGGGCTTACCTTCGAGTCCACAGTTACCTTAGCCA
TAACCATAGCGGTCGTTTCGGCGGTGGTGTCTGCCTTCTTGGACAACATGCCGGTGGTAGTTGCGTTAAGCCCCGTGGTA
AAGACCTTGATAGAGGTGGGCCTCCCAGGAGGCGAGGTGCTCTGGTGGGCGCTGCTCTACGGCTCTACCATGGGAGGCAA
CATGACTTTGATAGGGAGTACCGCCAACATAGTGGCCCTAGGCATACTCGAGAGGCACGGGAGGACGGTGAAGTTCTGGG
ACTGGTTCAAGGTAGGGGTGGTAGTGGTGGCCCTCACGCTCGGGGTAGCTCTGGCCTCCCTTCTGTTCCACGCCTCCCTA
GTATACCACCAATAA

Upstream 100 bases:

>100_bases
CGTGCTCGCCGAAGGGGTGAGGGCAAGCGCTCCGGGGTAGCCGAGCTCCTCGAAAAGCCCCTTTAATACGAGCCCCCTTA
CGCGACCTACGGGGTACTAG

Downstream 100 bases:

>100_bases
CGCCAAGGCCCTGGCCCCCCAGAGGGAAGCCCTCTTTATCACGTCCCTAGGCAAGTCCCTTGCGCCCTTGTCCGCCCTAA
CCATCAACGTCCTAGGAGCC

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MNRNLLILIVAVTATFVISFVAFSTLKVEPEGPLKDVVEKILVNFKMKHCEWINVIREHGFDYHKALEECEVDLNSTVVA
FSEALATASFVAAILGTLMFWNKRLSFVMIGVALLLFLGTAPFEMILEHMELGLILFLISMMIIVEYLNESGVLGWITVK
LVKASKFQPLRFVAILGFLSWIMAALVDEVTSIVFVTRVVISIASMLELNPIPLVIYSVMATNIGSSATMIGNPIGIYIA
LQSGKSFEDFLEWATPGSLLALLTLLPIALVWLSKTGLFKKLREKGSMISLDEWSALGISSELYEAYKSGKLTGKEAEEV
EAALKRFKRGWAFFIAVLLLIAFHTPLSGALNQFLAYLYAAMSVGSEVSIHAEVPPDALLVFSPVVVAAILMFTHEEPRR
LVEKGVEWWTLLFFMFLFAIASALSYTGVTDKMAYSLVQMVGGLTFESTVTLAITIAVVSAVVSAFLDNMPVVVALSPVV
KTLIEVGLPGGEVLWWALLYGSTMGGNMTLIGSTANIVALGILERHGRTVKFWDWFKVGVVVVALTLGVALASLLFHASL
VYHQ

Sequences:

>Translated_564_residues
MNRNLLILIVAVTATFVISFVAFSTLKVEPEGPLKDVVEKILVNFKMKHCEWINVIREHGFDYHKALEECEVDLNSTVVA
FSEALATASFVAAILGTLMFWNKRLSFVMIGVALLLFLGTAPFEMILEHMELGLILFLISMMIIVEYLNESGVLGWITVK
LVKASKFQPLRFVAILGFLSWIMAALVDEVTSIVFVTRVVISIASMLELNPIPLVIYSVMATNIGSSATMIGNPIGIYIA
LQSGKSFEDFLEWATPGSLLALLTLLPIALVWLSKTGLFKKLREKGSMISLDEWSALGISSELYEAYKSGKLTGKEAEEV
EAALKRFKRGWAFFIAVLLLIAFHTPLSGALNQFLAYLYAAMSVGSEVSIHAEVPPDALLVFSPVVVAAILMFTHEEPRR
LVEKGVEWWTLLFFMFLFAIASALSYTGVTDKMAYSLVQMVGGLTFESTVTLAITIAVVSAVVSAFLDNMPVVVALSPVV
KTLIEVGLPGGEVLWWALLYGSTMGGNMTLIGSTANIVALGILERHGRTVKFWDWFKVGVVVVALTLGVALASLLFHASL
VYHQ
>Mature_564_residues
MNRNLLILIVAVTATFVISFVAFSTLKVEPEGPLKDVVEKILVNFKMKHCEWINVIREHGFDYHKALEECEVDLNSTVVA
FSEALATASFVAAILGTLMFWNKRLSFVMIGVALLLFLGTAPFEMILEHMELGLILFLISMMIIVEYLNESGVLGWITVK
LVKASKFQPLRFVAILGFLSWIMAALVDEVTSIVFVTRVVISIASMLELNPIPLVIYSVMATNIGSSATMIGNPIGIYIA
LQSGKSFEDFLEWATPGSLLALLTLLPIALVWLSKTGLFKKLREKGSMISLDEWSALGISSELYEAYKSGKLTGKEAEEV
EAALKRFKRGWAFFIAVLLLIAFHTPLSGALNQFLAYLYAAMSVGSEVSIHAEVPPDALLVFSPVVVAAILMFTHEEPRR
LVEKGVEWWTLLFFMFLFAIASALSYTGVTDKMAYSLVQMVGGLTFESTVTLAITIAVVSAVVSAFLDNMPVVVALSPVV
KTLIEVGLPGGEVLWWALLYGSTMGGNMTLIGSTANIVALGILERHGRTVKFWDWFKVGVVVVALTLGVALASLLFHASL
VYHQ

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Homo sapiens, GI157266326, Length=151, Percent_Identity=37.0860927152318, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24581759, Length=492, Percent_Identity=26.8292682926829, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI28574683, Length=492, Percent_Identity=26.8292682926829, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI28574681, Length=492, Percent_Identity=26.8292682926829, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI28574685, Length=492, Percent_Identity=26.8292682926829, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI28574678, Length=492, Percent_Identity=26.8292682926829, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI19920704, Length=492, Percent_Identity=26.8292682926829, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI221472711, Length=448, Percent_Identity=24.1071428571429, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24581764, Length=450, Percent_Identity=24.4444444444444, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24656008, Length=473, Percent_Identity=26.0042283298097, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45550608, Length=215, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 61796; Mature: 61796

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNLLILIVAVTATFVISFVAFSTLKVEPEGPLKDVVEKILVNFKMKHCEWINVIREHG
CCCCEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDYHKALEECEVDLNSTVVAFSEALATASFVAAILGTLMFWNKRLSFVMIGVALLLFLGT
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APFEMILEHMELGLILFLISMMIIVEYLNESGVLGWITVKLVKASKFQPLRFVAILGFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHEEHHCCCCCHHHHHHHHHHHH
WIMAALVDEVTSIVFVTRVVISIASMLELNPIPLVIYSVMATNIGSSATMIGNPIGIYIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
LQSGKSFEDFLEWATPGSLLALLTLLPIALVWLSKTGLFKKLREKGSMISLDEWSALGIS
EECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
SELYEAYKSGKLTGKEAEEVEAALKRFKRGWAFFIAVLLLIAFHTPLSGALNQFLAYLYA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AMSVGSEVSIHAEVPPDALLVFSPVVVAAILMFTHEEPRRLVEKGVEWWTLLFFMFLFAI
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ASALSYTGVTDKMAYSLVQMVGGLTFESTVTLAITIAVVSAVVSAFLDNMPVVVALSPVV
HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH
KTLIEVGLPGGEVLWWALLYGSTMGGNMTLIGSTANIVALGILERHGRTVKFWDWFKVGV
HHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEHHHHHHHH
VVVALTLGVALASLLFHASLVYHQ
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRNLLILIVAVTATFVISFVAFSTLKVEPEGPLKDVVEKILVNFKMKHCEWINVIREHG
CCCCEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDYHKALEECEVDLNSTVVAFSEALATASFVAAILGTLMFWNKRLSFVMIGVALLLFLGT
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APFEMILEHMELGLILFLISMMIIVEYLNESGVLGWITVKLVKASKFQPLRFVAILGFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHEEHHCCCCCHHHHHHHHHHHH
WIMAALVDEVTSIVFVTRVVISIASMLELNPIPLVIYSVMATNIGSSATMIGNPIGIYIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
LQSGKSFEDFLEWATPGSLLALLTLLPIALVWLSKTGLFKKLREKGSMISLDEWSALGIS
EECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
SELYEAYKSGKLTGKEAEEVEAALKRFKRGWAFFIAVLLLIAFHTPLSGALNQFLAYLYA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AMSVGSEVSIHAEVPPDALLVFSPVVVAAILMFTHEEPRRLVEKGVEWWTLLFFMFLFAI
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ASALSYTGVTDKMAYSLVQMVGGLTFESTVTLAITIAVVSAVVSAFLDNMPVVVALSPVV
HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH
KTLIEVGLPGGEVLWWALLYGSTMGGNMTLIGSTANIVALGILERHGRTVKFWDWFKVGV
HHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEHHHHHHHH
VVVALTLGVALASLLFHASLVYHQ
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]