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The map label for this gene is rps24e

Identifier: 156937066

GI number: 156937066

Start: 233270

End: 233587

Strand: Reverse

Name: rps24e

Synonym: Igni_0271

Alternate gene names: 156937066

Gene position: 233587-233270 (Counterclockwise)

Preceding gene: 156937067

Following gene: 156937065

Centisome position: 18.0

GC content: 56.92

Gene sequence:

>318_bases
TTGAGCGAGTTCGAGGTCCAAGTGGTTAACAAGAGGTGGAACCCCTTAGCGGAGAGGGAGGAGCTGGACCTAGTGCTGGT
GCACGTGGCGAAGCCCACTCCCTCGAGGTGTGAGGTAGAGGAGAAGGTTGCCCAAATGCTCGGGGTAGACAAGAAGTTGG
TGGTGGTGACCAAGCTGTTGAGCGAGTACGGCATCGGGCGGACCAGGGCCAGGGCACACGTATACAAGAACTACGAGAGG
TTGCAGAAGTTAGAACCGGAAAAGGTTAAGAAGCTCCACGAGCAGTGCTCCCAGGCTCAAGAAGCACAGGCCCAGTGA

Upstream 100 bases:

>100_bases
AGGAACCAGATAGCCGGCTACATAACCCACCTGAAGAAGGTTGAAGAGAGGAGGCAGAAGGTCGAGCTCAGAGAGGAGTA
CTTGTGAGGGGTGAGGGGGG

Downstream 100 bases:

>100_bases
GGTGATGGGAGGTGCCCAAACACGCCCAAGTGAAGCCCCACTTGTTGTACGAGTGGGACTACGAGAAAGGGATCATAAAG
CCCAAGAACAAGAGGTGTCC

Product: SSU ribosomal protein S24E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSEFEVQVVNKRWNPLAEREELDLVLVHVAKPTPSRCEVEEKVAQMLGVDKKLVVVTKLLSEYGIGRTRARAHVYKNYER
LQKLEPEKVKKLHEQCSQAQEAQAQ

Sequences:

>Translated_105_residues
MSEFEVQVVNKRWNPLAEREELDLVLVHVAKPTPSRCEVEEKVAQMLGVDKKLVVVTKLLSEYGIGRTRARAHVYKNYER
LQKLEPEKVKKLHEQCSQAQEAQAQ
>Mature_104_residues
SEFEVQVVNKRWNPLAEREELDLVLVHVAKPTPSRCEVEEKVAQMLGVDKKLVVVTKLLSEYGIGRTRARAHVYKNYERL
QKLEPEKVKKLHEQCSQAQEAQAQ

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS24_IGNH4 (A8A953)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434862.1
- ProteinModelPortal:   A8A953
- SMR:   A8A953
- STRING:   A8A953
- GeneID:   5562249
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0271
- eggNOG:   arNOG18289
- HOGENOM:   HBG553552
- OMA:   REIVMIL
- BioCyc:   IHOS453591:IGNI_0271-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00545
- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- Gene3D:   G3DSA:3.30.70.330
- ProDom:   PD006052

Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 12155; Mature: 12024

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00529 RIBOSOMAL_S24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFEVQVVNKRWNPLAEREELDLVLVHVAKPTPSRCEVEEKVAQMLGVDKKLVVVTKLL
CCCCHHHHHCCCCCCCCCHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
SEYGIGRTRARAHVYKNYERLQKLEPEKVKKLHEQCSQAQEAQAQ
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEFEVQVVNKRWNPLAEREELDLVLVHVAKPTPSRCEVEEKVAQMLGVDKKLVVVTKLL
CCCHHHHHCCCCCCCCCHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
SEYGIGRTRARAHVYKNYERLQKLEPEKVKKLHEQCSQAQEAQAQ
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA