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The map label for this gene is rps17E

Identifier: 156937067

GI number: 156937067

Start: 233601

End: 233825

Strand: Reverse

Name: rps17E

Synonym: Igni_0272

Alternate gene names: 156937067

Gene position: 233825-233601 (Counterclockwise)

Preceding gene: 156937068

Following gene: 156937066

Centisome position: 18.02

GC content: 49.33

Gene sequence:

>225_bases
TTGGGGAAGGTAAGGATCAACGTGGTTAAGAGGACCGCGAGGAAGCTCCTCCAGATGTACCCGGACTTGTTCACTAGGGA
CTTCGAGCACAATAAGAAGGTAGTAAGCCAATTAATAGAGGTTAACTCCAAGAAGCTGAGGAACCAGATAGCCGGCTACA
TAACCCACCTGAAGAAGGTTGAAGAGAGGAGGCAGAAGGTCGAGCTCAGAGAGGAGTACTTGTGA

Upstream 100 bases:

>100_bases
TACGCTACAATAGTTAAGAGGGGCGGGCCGGAGGCGTTGGTGGGCGTCGTCGGGAAAGCAAAATTAAATCGGCCTTGGTC
CAGCGCGGGGTGGCGATAGA

Downstream 100 bases:

>100_bases
GGGGTGAGGGGGGTTGAGCGAGTTCGAGGTCCAAGTGGTTAACAAGAGGTGGAACCCCTTAGCGGAGAGGGAGGAGCTGG
ACCTAGTGCTGGTGCACGTG

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MGKVRINVVKRTARKLLQMYPDLFTRDFEHNKKVVSQLIEVNSKKLRNQIAGYITHLKKVEERRQKVELREEYL

Sequences:

>Translated_74_residues
MGKVRINVVKRTARKLLQMYPDLFTRDFEHNKKVVSQLIEVNSKKLRNQIAGYITHLKKVEERRQKVELREEYL
>Mature_73_residues
GKVRINVVKRTARKLLQMYPDLFTRDFEHNKKVVSQLIEVNSKKLRNQIAGYITHLKKVEERRQKVELREEYL

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323617, Length=59, Percent_Identity=45.7627118644068, Blast_Score=60, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320655, Length=59, Percent_Identity=45.7627118644068, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_IGNH4 (A8A954)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434863.1
- ProteinModelPortal:   A8A954
- SMR:   A8A954
- STRING:   A8A954
- GeneID:   5562934
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0272
- eggNOG:   arNOG14336
- HOGENOM:   HBG460442
- OMA:   TRDFEHN
- ProtClustDB:   PRK01151
- BioCyc:   IHOS453591:IGNI_0272-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20
- PANTHER:   PTHR10732

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 8955; Mature: 8824

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVRINVVKRTARKLLQMYPDLFTRDFEHNKKVVSQLIEVNSKKLRNQIAGYITHLKKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERRQKVELREEYL
HHHHHHHHHHHHCC
>Mature Secondary Structure 
GKVRINVVKRTARKLLQMYPDLFTRDFEHNKKVVSQLIEVNSKKLRNQIAGYITHLKKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERRQKVELREEYL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA