Click here to switch to the map view.

The map label for this gene is rps27Ae

Identifier: 156937065

GI number: 156937065

Start: 233082

End: 233258

Strand: Reverse

Name: rps27Ae

Synonym: Igni_0270

Alternate gene names: 156937065

Gene position: 233258-233082 (Counterclockwise)

Preceding gene: 156937066

Following gene: 156937063

Centisome position: 17.98

GC content: 56.5

Gene sequence:

>177_bases
GTGCCCAAACACGCCCAAGTGAAGCCCCACTTGTTGTACGAGTGGGACTACGAGAAAGGGATCATAAAGCCCAAGAACAA
GAGGTGTCCGCGCTGCGGCAGCTTCATGGCACACCACTTGAAGCCCGTGCCCAGGTGGCACTGCGGCAAGTGCGGCTACA
CGATCTTCGAAAAGTAA

Upstream 100 bases:

>100_bases
ACTACGAGAGGTTGCAGAAGTTAGAACCGGAAAAGGTTAAGAAGCTCCACGAGCAGTGCTCCCAGGCTCAAGAAGCACAG
GCCCAGTGAGGTGATGGGAG

Downstream 100 bases:

>100_bases
GGGCCTACCTCCCCAAAGCCTTAAGGAGCTCCTCAACGGCCTTTTCTGGATTCGGGGACTTCGTTATATAACCCCCAACC
ACCACCACGTCCGCCTTCCC

Product: SSU ribosomal protein S27AE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MPKHAQVKPHLLYEWDYEKGIIKPKNKRCPRCGSFMAHHLKPVPRWHCGKCGYTIFEK

Sequences:

>Translated_58_residues
MPKHAQVKPHLLYEWDYEKGIIKPKNKRCPRCGSFMAHHLKPVPRWHCGKCGYTIFEK
>Mature_57_residues
PKHAQVKPHLLYEWDYEKGIIKPKNKRCPRCGSFMAHHLKPVPRWHCGKCGYTIFEK

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_IGNH4 (A8A952)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434861.1
- STRING:   A8A952
- GeneID:   5562796
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0270
- eggNOG:   arNOG18285
- HOGENOM:   HBG512791
- OMA:   EPVPRWH
- BioCyc:   IHOS453591:IGNI_0270-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR002906
- InterPro:   IPR022845

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 6920; Mature: 6789

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKHAQVKPHLLYEWDYEKGIIKPKNKRCPRCGSFMAHHLKPVPRWHCGKCGYTIFEK
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
PKHAQVKPHLLYEWDYEKGIIKPKNKRCPRCGSFMAHHLKPVPRWHCGKCGYTIFEK
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA