Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is mta [H]
Identifier: 15675682
GI number: 15675682
Start: 1545584
End: 1546321
Strand: Reverse
Name: mta [H]
Synonym: SPy_1863
Alternate gene names: 15675682
Gene position: 1546321-1545584 (Counterclockwise)
Preceding gene: 15675683
Following gene: 15675677
Centisome position: 83.47
GC content: 39.7
Gene sequence:
>738_bases ATGTCTCAATTCTATTCGACTGGAGAATTGGCCAACTTAGCTGGCGTTTCTATTCGAACTGTCCAATACTATGACCAACG TGGGATTTTGATTCCGACAGCATTGACAGCAGGTGGACGGCGACTCTATACGGATTCTGATTTAGAACAATTACGCATGA TTTGCTTTCTGCGCGATTTGGGATTTTCCATTGAGCAGATTCGCAAAGTCTTAGCAGAGGAAAATGCAGCCCAGGTGCTG GAATTGCTTCTAGTTGATCATATTGCGACTGCCAAGGAAGACTTGGCTGCAAAAGAGCAACAAGTTGACATAGCTGTCAA GATACTTGACAGACTTCGAAAACAAGACCCCCAGTCACTAGATTTTCTGATGGACATTTCGCTTAGCATGAAAAATCAAA AAGCTTGGAAAAAATTACAATGGAAGATGGGTATCAGTATATTTTTAGCCATTGTTTCATATGTAGGACTTATTTTACTA TCTAGTTATCTGCAAAAATTTTGGTTAGTTTATGTTGCTATGGGACTATTTCTACCAGGTTTCAGTTGGTTGGTAATTTA TTTTAGGAAGCAATTTATTTATCTCTGTCCCCATTGTCATCAGAAATTTGAACCTAGCTTTAATGAATTTGCCCTTGCAG GCCATACACCACGAACCAGAAAGTTAACCTGCTCCCATTGCCATCAAAAATCGTATTGCTTGGAACTGGCAAAAGAGGAC ACTGTCTCAAGAAGATAA
Upstream 100 bases:
>100_bases GCTTATAACGCTAGGTCATGTAAGATAGGGGCATATCAAGAGGGAGTCGGGTGCACACGAGTTGCTTTTGATCACTAAAT GATAGAAAGAAGGTGTGGAA
Downstream 100 bases:
>100_bases GCACTAACTCATAAAAAAACTAGCCTGAGATCCTTCTCAAGCTAGTTTTTGTTTTTTTAGAATGGTAATTTACCAGCAAA AGCGCCTAATGTTTTCTTAG
Product: putative transcriptional activator
Products: NA
Alternate protein names: Multidrug transporter activation protein [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSQFYSTGELANLAGVSIRTVQYYDQRGILIPTALTAGGRRLYTDSDLEQLRMICFLRDLGFSIEQIRKVLAEENAAQVL ELLLVDHIATAKEDLAAKEQQVDIAVKILDRLRKQDPQSLDFLMDISLSMKNQKAWKKLQWKMGISIFLAIVSYVGLILL SSYLQKFWLVYVAMGLFLPGFSWLVIYFRKQFIYLCPHCHQKFEPSFNEFALAGHTPRTRKLTCSHCHQKSYCLELAKED TVSRR
Sequences:
>Translated_245_residues MSQFYSTGELANLAGVSIRTVQYYDQRGILIPTALTAGGRRLYTDSDLEQLRMICFLRDLGFSIEQIRKVLAEENAAQVL ELLLVDHIATAKEDLAAKEQQVDIAVKILDRLRKQDPQSLDFLMDISLSMKNQKAWKKLQWKMGISIFLAIVSYVGLILL SSYLQKFWLVYVAMGLFLPGFSWLVIYFRKQFIYLCPHCHQKFEPSFNEFALAGHTPRTRKLTCSHCHQKSYCLELAKED TVSRR >Mature_244_residues SQFYSTGELANLAGVSIRTVQYYDQRGILIPTALTAGGRRLYTDSDLEQLRMICFLRDLGFSIEQIRKVLAEENAAQVLE LLLVDHIATAKEDLAAKEQQVDIAVKILDRLRKQDPQSLDFLMDISLSMKNQKAWKKLQWKMGISIFLAIVSYVGLILLS SYLQKFWLVYVAMGLFLPGFSWLVIYFRKQFIYLCPHCHQKFEPSFNEFALAGHTPRTRKLTCSHCHQKSYCLELAKEDT VSRR
Specific function: Global transcriptional regulator that activates transcription of bmr and blt by binding directly to their promoter. Stimulates also the expression of the mta gene itself, ydfK and ymfE [H]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789687, Length=69, Percent_Identity=44.9275362318841, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 - InterPro: IPR012925 - InterPro: IPR015358 [H]
Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind; PF07739 TipAS [H]
EC number: NA
Molecular weight: Translated: 28252; Mature: 28121
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFYSTGELANLAGVSIRTVQYYDQRGILIPTALTAGGRRLYTDSDLEQLRMICFLRDL CCCCCCCCCHHHHCCCEEEEEEEECCCCEEEEHHHCCCCCEECCCCCHHHHHHHHHHHHH GFSIEQIRKVLAEENAAQVLELLLVDHIATAKEDLAAKEQQVDIAVKILDRLRKQDPQSL CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DFLMDISLSMKNQKAWKKLQWKMGISIFLAIVSYVGLILLSSYLQKFWLVYVAMGLFLPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FSWLVIYFRKQFIYLCPHCHQKFEPSFNEFALAGHTPRTRKLTCSHCHQKSYCLELAKED HHHHHHHHHHHHHHHCHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TVSRR CCCCC >Mature Secondary Structure SQFYSTGELANLAGVSIRTVQYYDQRGILIPTALTAGGRRLYTDSDLEQLRMICFLRDL CCCCCCCCHHHHCCCEEEEEEEECCCCEEEEHHHCCCCCEECCCCCHHHHHHHHHHHHH GFSIEQIRKVLAEENAAQVLELLLVDHIATAKEDLAAKEQQVDIAVKILDRLRKQDPQSL CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DFLMDISLSMKNQKAWKKLQWKMGISIFLAIVSYVGLILLSSYLQKFWLVYVAMGLFLPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FSWLVIYFRKQFIYLCPHCHQKFEPSFNEFALAGHTPRTRKLTCSHCHQKSYCLELAKED HHHHHHHHHHHHHHHCHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TVSRR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9150240; 9384377 [H]