Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is fps [H]
Identifier: 15675402
GI number: 15675402
Start: 1229551
End: 1230423
Strand: Reverse
Name: fps [H]
Synonym: SPy_1498
Alternate gene names: 15675402
Gene position: 1230423-1229551 (Counterclockwise)
Preceding gene: 15675403
Following gene: 15675401
Centisome position: 66.42
GC content: 41.01
Gene sequence:
>873_bases ATGGACAAATTAGCTAGAATTGACGAAGCCATTCGTCGCTACTATAAGACGACTAGTAACGGTGTATCTGAAGAGTTGAT TGATGCTATCTTGTATTCTGTTGACAGTGGTGGCAAGCGCATTCGCCCACTTATCTTATTAGAGATGATTGAGGGATTTG GGGTATCGTTACAGAATGCTCATTTTGATTTGGCTGCAGCTCTTGAAATGATTCATACAGGAAGTCTGATTCACGATGAT TTGCCAGCCATGGATAATGATGATTACCGACGTGGCAGACTGACCAATCACAAACAATTTGGAGAAGCCACGGCCATTTT GGCGGGAGACAGCTTATTTTTAGACCCCTTTGGGTTAATAGCTCAAGCTGAATTAAATAGTGAGGTTAAAGTAGCCTTAA TCCAAGAACTTTCCCTAGCTTCAGGAACTTTTGGCATGGTTGGTGGTCAGATGTTAGATATGAAAGGGGAAAATCAAGCA TTAAGTCTTCCTCAGTTGTCACTGATTCACCTCAATAAAACCGGAAAATTATTAGCTTTTCCTTTTAAAGCAGCAGCTCT TATAACAGAACAGGCTATGACTGTTCGTCAACAACTAGAGCAAGCGGGAATGCTCATCGGGCACGCCTTTCAGATTAGGG ATGATATTTTAGACGTGACAGCTAGCTTTGAAGATCTTGGAAAAACGCCTAAAAAGGACTTATTCGCAGAAAAAGCTACT TATCCAAGTTTACTGGGGTTAGAAGCCTCTTACCAACTGCTGACAGAGAGTTTAGATCAGGCTTTGACGATTTTTCAGAC ACTAGAAAGCGATGTAGGCTTTAAGCCTCAAATAATTACAAAACTGATAGAAGGGTTACGACTTAATGCCTAA
Upstream 100 bases:
>100_bases TGCTTCTCTCAAAAGAACTTCAAAAGACCTTACAAGCGGCAGAAAAAACACTCGTCAAAGTGATGCAAGCTGATGGCACA GAAGTAGATATGGATGATTA
Downstream 100 bases:
>100_bases AGAAAGAGTAGATGTGTTAGCCTATAAGCAAGGATTATTTGAGACCAGAGAGCAAGCTAAGCGTGGTGTCATGGCAGGCT TAGTGGTCTCTGTGATTAAT
Product: putative geranyltranstransferase
Products: NA
Alternate protein names: FPP synthase; (2E,6E)-farnesyl diphosphate synthase; Geranyltranstransferase [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQA LSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKAT YPSLLGLEASYQLLTESLDQALTIFQTLESDVGFKPQIITKLIEGLRLNA
Sequences:
>Translated_290_residues MDKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQA LSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKAT YPSLLGLEASYQLLTESLDQALTIFQTLESDVGFKPQIITKLIEGLRLNA >Mature_290_residues MDKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQA LSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKAT YPSLLGLEASYQLLTESLDQALTIFQTLESDVGFKPQIITKLIEGLRLNA
Specific function: Unknown
COG id: COG0142
COG function: function code H; Geranylgeranyl pyrophosphate synthase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FPP/GGPP synthase family [H]
Homologues:
Organism=Homo sapiens, GI50659086, Length=234, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=8e-18, Organism=Escherichia coli, GI1786623, Length=243, Percent_Identity=42.3868312757202, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789578, Length=215, Percent_Identity=30.6976744186047, Blast_Score=96, Evalue=3e-21, Organism=Drosophila melanogaster, GI24651612, Length=262, Percent_Identity=30.9160305343511, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000092 - InterPro: IPR017446 - InterPro: IPR008949 [H]
Pfam domain/function: PF00348 polyprenyl_synt [H]
EC number: =2.5.1.10 [H]
Molecular weight: Translated: 31825; Mature: 31825
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00723 POLYPRENYL_SYNTHET_1 ; PS00444 POLYPRENYL_SYNTHET_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNA CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCC HFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLI HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCEEECCHHHH AQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAF HHHCCCCCHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCEECCCCEEEEEECCCCCEEEE PFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCC YPSLLGLEASYQLLTESLDQALTIFQTLESDVGFKPQIITKLIEGLRLNA CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNA CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCC HFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLI HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCEEECCHHHH AQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAF HHHCCCCCHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCEECCCCEEEEEECCCCCEEEE PFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCC YPSLLGLEASYQLLTESLDQALTIFQTLESDVGFKPQIITKLIEGLRLNA CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9515931 [H]