Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ynbA [H]
Identifier: 15674942
GI number: 15674942
Start: 765195
End: 766433
Strand: Direct
Name: ynbA [H]
Synonym: SPy_0922
Alternate gene names: 15674942
Gene position: 765195-766433 (Clockwise)
Preceding gene: 15674941
Following gene: 15674943
Centisome position: 41.31
GC content: 39.63
Gene sequence:
>1239_bases ATGATTGAGACAAAGCGTCAGCAAGAAAGAGTGATTCTTTTAGGAGTTGAGCTTCAGACAACAGAACATTTTGACATGTC CATGACAGAATTAGCTAATCTTGCCAAAACAGCTGGTGTCAAAGTTATGGCAAGTTTCAGCCAAAAACGAGAACGTTACG ACAGCAAAACCTTTATCGGCTCAGGGAAACTGGATGAGATTAAGGCGATTGTGGAAGCTGATGAGATTGATGCAGTTATT GTGAACAATCGGTTGACTGCTAGGCAAAATGCTAATCTAGAAGCTGTTTTAGAGGTAAAAGTCATTGACCGTATGCAGTT AATCTTAGATATTTTTGCCATGCGTGCCAGAAGCCATGAGGGCAAATTACAAGTACACCTTGCCCAATTGAAATATATGT TACCTCGTTTGGTTGGACAGGGCATCATGTTAAGTCGTCAAGCAGGTGGTATTGGGAGCCGTGGACCAGGTGAAAGCCAA CTAGAGTTAAATCGCCGTTCGATTCGTCATCAGATTGCTGATATTGAACGCCAATTAACTCAGGTAGAGAAAAATCGTCA AACAATTAGAGATCGTCGTGTGGGTTCAGATACCTTTAAAATTGGCTTGATTGGCTACACCAATGCTGGCAAGTCAACCA TTATGAACTTGTTGACAGATGACAGCCACTATGAAGCCAATGAATTATTTGCTACCTTAGATGCAACTACAAAGCAACTC TATTTAGAAAATCAATTTCAAGCAACCTTAACAGACACCGTAGGCTTTATTCAAGACTTGCCAACGGAATTAGTGGCTGC TTTTAAATCAACCCTAGAAGAAAGCAAATATGTGGATTTGCTGTTACATGTGATTGATGCGAGTGATCCCAATCATAGTG AGCAAGAAAAAGTGGTTTTAAACCTTCTAAAAGAGCTAGACATGCTTAATATTCCGCGTTTAGCTATTTATAACAAGGTG GATATAGCAGAACAATTCACAGCTACTGCTTTTCCAAATATCAGGATTTCAGCCCGTTCAAAGGATAGCAAAATTCTCTT GAGACGTTTAATCATTGACCAAATTCGAGACCAGTTTGTTCCTTTTAGAATCAAAGTGCATCAAGACAAGGCGTACAAGC TATATGATTTGAATCGAGTTGCTCTTTTAGACCACTACACGTTTGACCAAGAAATAGAGGATATTTCGGGCTACATTTCC CCAAAACAGCAATGGAGACTTGACGATTTTTATGAATAA
Upstream 100 bases:
>100_bases TTTTCTTGGTCAGAAAGAGAAGTCATGACGCAAAATTAGCAGAATCTGTTGAAGATATGTTATAATAGAATTTACGGAAT TTGGAGGATTGGTAAAGGTG
Downstream 100 bases:
>100_bases TTATATTGATTTAGCAAAAACCTATGGTGGATTTACTAGTCTGGATACCAACTACCTAAACCATCTGTTAGCCAGTTTGA CAGACCAGCAAAAACTAGCT
Product: putative GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIGSGKLDEIKAIVEADEIDAVI VNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ LELNRRSIRHQIADIERQLTQVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVLNLLKELDMLNIPRLAIYNKV DIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFVPFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYIS PKQQWRLDDFYE
Sequences:
>Translated_412_residues MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIGSGKLDEIKAIVEADEIDAVI VNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ LELNRRSIRHQIADIERQLTQVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVLNLLKELDMLNIPRLAIYNKV DIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFVPFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYIS PKQQWRLDDFYE >Mature_412_residues MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIGSGKLDEIKAIVEADEIDAVI VNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ LELNRRSIRHQIADIERQLTQVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVLNLLKELDMLNIPRLAIYNKV DIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFVPFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYIS PKQQWRLDDFYE
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133116, Length=193, Percent_Identity=36.2694300518135, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI310133118, Length=193, Percent_Identity=36.2694300518135, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI310124269, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310124267, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310124171, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310124169, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25, Organism=Escherichia coli, GI1790615, Length=333, Percent_Identity=44.1441441441441, Blast_Score=265, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17561038, Length=308, Percent_Identity=29.8701298701299, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24650079, Length=309, Percent_Identity=31.7152103559871, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 47184; Mature: 47184
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIG CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEC SGKLDEIKAIVEADEIDAVIVNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHE CCCHHHHHHHHHHCCCCEEEECCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC GKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQLELNRRSIRHQIADIERQLT CEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL HHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH NLLKELDMLNIPRLAIYNKVDIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFV HHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC PFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYISPKQQWRLDDFYE CEEEEEECCCCEEEEECCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIG CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEC SGKLDEIKAIVEADEIDAVIVNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHE CCCHHHHHHHHHHCCCCEEEECCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC GKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQLELNRRSIRHQIADIERQLT CEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL HHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH NLLKELDMLNIPRLAIYNKVDIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFV HHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC PFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYISPKQQWRLDDFYE CEEEEEECCCCEEEEECCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]