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The map label for this gene is fni

Identifier: 15674904

GI number: 15674904

Start: 726374

End: 727363

Strand: Direct

Name: fni

Synonym: SPy_0879

Alternate gene names: 15674904

Gene position: 726374-727363 (Clockwise)

Preceding gene: 15674903

Following gene: 15674907

Centisome position: 39.21

GC content: 42.12

Gene sequence:

>990_bases
ATGACTAACCGTAAAGATGATCACATCAAATATGCTCTCAAGTACCAATCGCCTTATAATGCTTTTGATGACATAGAACT
CATACACCATTCCTTACCTAGCTATGATTTGTCTGATATTGATCTCAGTACTCATTTTGCTGGGCAAGACTTCGACTTTC
CCTTTTACATCAATGCCATGACAGGAGGAAGTCAAAAAGGCAAAGCTGTCAATGAAAAATTGGCCAAAGTAGCAGCAGCA
ACAGGGATTGTCATGGTGACAGGGTCTTATAGCGCTGCTTTAAAAAATCCTAACGACGATTCCTATCGTTTACATGAGGT
GGCAGATAACTTGAAACTAGCCACGAATATTGGTCTAGATAAACCTGTGGCGCTAGGACAACAAACGGTTCAAGAAATGC
AGCCCCTCTTTTTACAGGTTCATGTGAATGTGATGCAAGAGTTGCTGATGCCAGAGGGTGAGCGCGTCTTTCATACCTGG
AAAAAACACCTCGCTGAATACGCTAGTCAAATACCAGTTCCTGTCATTCTCAAAGAAGTTGGTTTTGGCATGGATGTCAA
TAGTATCAAGCTAGCACATGACCTAGGCATTCAAACCTTTGATATTTCAGGTAGAGGAGGAACTTCATTTGCTTACATTG
AAAATCAAAGAGGGGGAGACCGCTCTTACTTAAACGATTGGGGACAAACCACTGTTCAGTGCTTACTGAATGCACAAGGA
CTGATGGACCAAGTGGAAATCTTAGCTTCGGGTGGTGTCAGACACCCCTTGGACATGATTAAGTGTTTTGTCTTAGGAGC
ACGTGCAGTGGGACTCTCACGCACCGTTTTAGAATTGGTCGAAAAATACCCAACCGAGCGTGTGATTGCTATCGTTAATG
GCTGGAAAGAAGAATTAAAAATCATTATGTGTGCTCTTGACTGTAAAACTATTAAAGAATTAAAGGGAGTCGACTACTTA
CTATATGGACGCTTGCAGCAGGTCAATTAG

Upstream 100 bases:

>100_bases
GGCATCGCGCTTGCCTTTAATCAGGATGCTAGAGATACCCTTATTTCCAAATGGCAAGAAGCTGATATCGCATTACTTTA
TCAAGAAAGGTGGGGAGAGA

Downstream 100 bases:

>100_bases
GCTTCATCACCTCTACAATAGTGTCACCTACTACAAAGATGATAGAGCTTTTTTAGAACATAATATAAAATATTTATAAA
TACCTCATCAAACTCAGAAT

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTNRKDDHIKYALKYQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYINAMTGGSQKGKAVNEKLAKVAAA
TGIVMVTGSYSAALKNPNDDSYRLHEVADNLKLATNIGLDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTW
KKHLAEYASQIPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRSYLNDWGQTTVQCLLNAQG
LMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTERVIAIVNGWKEELKIIMCALDCKTIKELKGVDYL
LYGRLQQVN

Sequences:

>Translated_329_residues
MTNRKDDHIKYALKYQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYINAMTGGSQKGKAVNEKLAKVAAA
TGIVMVTGSYSAALKNPNDDSYRLHEVADNLKLATNIGLDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTW
KKHLAEYASQIPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRSYLNDWGQTTVQCLLNAQG
LMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTERVIAIVNGWKEELKIIMCALDCKTIKELKGVDYL
LYGRLQQVN
>Mature_328_residues
TNRKDDHIKYALKYQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYINAMTGGSQKGKAVNEKLAKVAAAT
GIVMVTGSYSAALKNPNDDSYRLHEVADNLKLATNIGLDKPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWK
KHLAEYASQIPVPVILKEVGFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRSYLNDWGQTTVQCLLNAQGL
MDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTERVIAIVNGWKEELKIIMCALDCKTIKELKGVDYLL
YGRLQQVN

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IDI2_STRP1 (P65103)

Other databases:

- EMBL:   AE004092
- EMBL:   CP000017
- RefSeq:   NP_269078.1
- RefSeq:   YP_282048.1
- ProteinModelPortal:   P65103
- SMR:   P65103
- EnsemblBacteria:   EBSTRT00000000135
- EnsemblBacteria:   EBSTRT00000028957
- GeneID:   3572236
- GeneID:   901037
- GenomeReviews:   AE004092_GR
- GenomeReviews:   CP000017_GR
- KEGG:   spy:SPy_0879
- KEGG:   spz:M5005_Spy_0685
- GeneTree:   EBGT00050000027560
- HOGENOM:   HBG354479
- OMA:   GSQRAAI
- ProtClustDB:   PRK05437
- BioCyc:   SPYO160490:SPY0879-MONOMER
- BioCyc:   SPYO293653:M5005_SPY0685-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00354
- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10578:SF3
- PIRSF:   PIRSF003314
- TIGRFAMs:   TIGR02151

Pfam domain/function: PF01070 FMN_dh

EC number: =5.3.3.2

Molecular weight: Translated: 36650; Mature: 36518

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRKDDHIKYALKYQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYINAM
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEE
TGGSQKGKAVNEKLAKVAAATGIVMVTGSYSAALKNPNDDSYRLHEVADNLKLATNIGLD
CCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHEECCCCCCCCHHHHHHCCCEEEECCCCC
KPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQIPVPVILKEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
GFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRSYLNDWGQTTVQCLLNAQG
CCCCCCCCEEEHHHCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTERVIAIVNGWKEELK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCHHHHE
IIMCALDCKTIKELKGVDYLLYGRLQQVN
EEHHHHCHHHHHHHCCCCEEECCHHHCCC
>Mature Secondary Structure 
TNRKDDHIKYALKYQSPYNAFDDIELIHHSLPSYDLSDIDLSTHFAGQDFDFPFYINAM
CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEE
TGGSQKGKAVNEKLAKVAAATGIVMVTGSYSAALKNPNDDSYRLHEVADNLKLATNIGLD
CCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHEECCCCCCCCHHHHHHCCCEEEECCCCC
KPVALGQQTVQEMQPLFLQVHVNVMQELLMPEGERVFHTWKKHLAEYASQIPVPVILKEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
GFGMDVNSIKLAHDLGIQTFDISGRGGTSFAYIENQRGGDRSYLNDWGQTTVQCLLNAQG
CCCCCCCCEEEHHHCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LMDQVEILASGGVRHPLDMIKCFVLGARAVGLSRTVLELVEKYPTERVIAIVNGWKEELK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCHHHHE
IIMCALDCKTIKELKGVDYLLYGRLQQVN
EEHHHHCHHHHHHHCCCCEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296