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The map label for this gene is ybdN [H]

Identifier: 15674394

GI number: 15674394

Start: 176004

End: 177338

Strand: Direct

Name: ybdN [H]

Synonym: SPy_0189

Alternate gene names: 15674394

Gene position: 176004-177338 (Clockwise)

Preceding gene: 15674393

Following gene: 15674395

Centisome position: 9.5

GC content: 31.69

Gene sequence:

>1335_bases
GTGAAAAAGTATTTAAATCAAAATGTTTATGATGCATTGATAGAAAGATTACATTTTTTGTTTAATGATTTTCCTATTGT
CTATATTTCCTTCTCAGGTGGAAAAGATAGTGGGTTACTTCTTAATATTTTACTGGATTTTAGAGATAAATATTATCCGG
ATAGAGAAATAGGTGTGTTTCATCAAGATTTTGAAGCACAGTACAGTTTAACAACAAAATATGTTCAAGAAACATTCACT
TCTTTAGAAGGTAGAAAAAAAGTTTCTTTGTATTGGGTGTGCTTACCGATGGCTACTAGAACTGCACTTAGTAGTTATGA
AATGTTTTGGTATCCGTGGGATGACAAAACAGAAGATATCTGGGTAAGACCAATGCCATCTCAAGATTATGTTATTAATT
TGGAAAATAATTCAATTACTACTTATCGTTATAAAATGAATCAGGAGGATTTAGCGAAACAATTTGGTAGGTGGTATAAA
CAAATTCACGGAAATCAAAAAACAGTTTGTATATTAGGAAACCGTGCTTCAGAATCCTTACACAGATATAGTGGTTTTAT
CAATAAAAAGTATGGTTATCAAAAGGAATGCTGGATTACCAAACAATTCAAAGATGTCTGGACAGCATCTCCCTTATATG
ATTGGTCAGTGGAAGACATATGGCATGCTTACTATAAGTTTTCTTATTCTTATAACGAACTTTATGATCTATTTTATAAA
GCGGGTTTAAAACCATCACAAATGAGAGTTGCATCTCCTTTTCAAGACTATGCTGTTGATAGCCTAAATCTTTATAGAAT
AATAGATCAAGAAACTTGGGTAAAGCTTTTGGGACGTGTTCAAGGAGTTAACTTTTCGAATATTTATGGACGTACTAAAG
CAATGGGATATAAATCAATTGCTTTACCAAAGGGTCATTCGTGGAAGTCGTATACTCAGTTTCTTTTATCAACGCTACCA
GTGAGGTTAAGAAATAATTATGTTAGAAAATTTAATAAATCAATAGACTTTTGGCATAAAACAGGCGGAGGACTTGCGGA
GGAAACAATTAATGAACTAATTGAAAAAGGATATCGTATTGCTAGAAATGGTATTTCAAATTATACCTCTTTTAAACATT
CAAGGGTTATTTTTTTAGATCAAATTCCTGATGATACAGACGATATTGTAACAACAAAGGATATACCAAGCTGGAAACGA
ATGTGTTTCTGTATTTTAAAAAACGATCATATTTGTCGAACTATGGGGTTTGGTTTGACAAGAGAGCAACAAAAAATAGT
AGCCTTTTTAAAAGAGAAATATAAGACGAGTTTAAAGGAGTTAGAAAGTGAGTAA

Upstream 100 bases:

>100_bases
TAATTATTCAACTTGAAAAATTAAAAAACAAAAAGATCGAAAAAGAGATTCTTAGTGAATCTATGTATTAATATTTTTAA
ATGCATAATGAGGAAGTTTA

Downstream 100 bases:

>100_bases
TTTTATTAGTCCAGTCTATGAGATTAAATCAATTCCAATTGAAAAGATTTCTCCAAATGATTATAATCCGAATTCAGTTG
CTCCGCCTGAAATGAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVFHQDFEAQYSLTTKYVQETFT
SLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDIWVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYK
QIHGNQKTVCILGNRASESLHRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK
AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSYTQFLLSTLP
VRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRIARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKR
MCFCILKNDHICRTMGFGLTREQQKIVAFLKEKYKTSLKELESE

Sequences:

>Translated_444_residues
MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVFHQDFEAQYSLTTKYVQETFT
SLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDIWVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYK
QIHGNQKTVCILGNRASESLHRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK
AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSYTQFLLSTLP
VRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRIARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKR
MCFCILKNDHICRTMGFGLTREQQKIVAFLKEKYKTSLKELESE
>Mature_444_residues
MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVFHQDFEAQYSLTTKYVQETFT
SLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDIWVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYK
QIHGNQKTVCILGNRASESLHRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK
AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSYTQFLLSTLP
VRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRIARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKR
MCFCILKNDHICRTMGFGLTREQQKIVAFLKEKYKTSLKELESE

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=424, Percent_Identity=29.9528301886792, Blast_Score=191, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 52678; Mature: 52678

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVF
CCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCE
HQDFEAQYSLTTKYVQETFTSLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDI
ECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHCCCEEEEECCCCCCCCE
WVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYKQIHGNQKTVCILGNRASESL
EEECCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
HRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK
HHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSI
CCCCCCCEEECCCHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCEE
ALPKGHSWKSYTQFLLSTLPVRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRI
ECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
ARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKRMCFCILKNDHICRTMGFGLT
HHHCCHHHHCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHEEEEECCCCEEHHHCCCCC
REQQKIVAFLKEKYKTSLKELESE
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVF
CCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCE
HQDFEAQYSLTTKYVQETFTSLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDI
ECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHCCCEEEEECCCCCCCCE
WVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYKQIHGNQKTVCILGNRASESL
EEECCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
HRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK
HHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSI
CCCCCCCEEECCCHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCEE
ALPKGHSWKSYTQFLLSTLPVRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRI
ECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
ARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKRMCFCILKNDHICRTMGFGLT
HHHCCHHHHCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHEEEEECCCCEEHHHCCCCC
REQQKIVAFLKEKYKTSLKELESE
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]