Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ytbB
Identifier: 15673828
GI number: 15673828
Start: 1913544
End: 1914248
Strand: Reverse
Name: ytbB
Synonym: L96903
Alternate gene names: 15673828
Gene position: 1914248-1913544 (Counterclockwise)
Preceding gene: 15673829
Following gene: 15673826
Centisome position: 80.92
GC content: 34.04
Gene sequence:
>705_bases ATGACAGAAATAAAAAATATTATTTTTGATTGGGACAATACACTCTTCCCTTTTAAAGAAAAATATTGGGAATTAGCTCA CCGCCAACTTTTTTCAGAACAATTAGGACCATTTACTGACCAAGAGCTCAACCGTTTCATGGAGAAATACCATGAATTTG ATGAATTGCTTTGGCCACAAGTCCATCAAAGAAAAATGACGATTGAAGAGCTAAGAGAAGAAAGATTAAGTTTGACTATC GAATATTTTGATTTGAAAGTCGATGAAAATTATCTTACAGGCTTTTTCAAAAAATTCTTGAATAGATTGTTTGAATTGAT AGAGCCTGATGAACAACTCATCCAAAATCTAAAAAACCTTTCCAAAAACTACAAACTTGCCCTATTAAGTAATGGGGGTC ATGTGGAGCAGAGAGAAAAATTACGTCGTTCTCAAGTTGAAAAATTATTTTCGGTTTACATCTCTGGTGAAACAGGCTAT CTGAAACCAGATGCGCGTGCCTTTAAAAACGTGCTCACCAAAGAAAATTTCCAAACGTCTGAGACTTTAATGGTTGGAGA TCTTATCGAACATGACATCAAACCCGCCCAAGAGTTGGGAATGAAGACAGCATATATTGGACCTGAAAAAGAAACGATTG CTGATTATGAATTTACAAACATTCAAGATTTTTTTGATTCATTTATAGAAAAAAACGGTGATTAA
Upstream 100 bases:
>100_bases CATTGAGGAAGCAACTTAAAATTTTCGTCAGTAACTTTTTTTCTTGTGGAATACTTTAAAAGTTGATAAAATAGGCTTAA AGAAGGAATGAGGGAAATAG
Downstream 100 bases:
>100_bases CCGTTTTTTATTATTGGACTAGTTTTAAAGAGTCAGCAGCTAAATAAAGTCTGTCAATAGGCTTGTTAGACAACCGATAA ATTCCATTTTTGTTAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNRFMEKYHEFDELLWPQVHQRKMTIEELREERLSLTI EYFDLKVDENYLTGFFKKFLNRLFELIEPDEQLIQNLKNLSKNYKLALLSNGGHVEQREKLRRSQVEKLFSVYISGETGY LKPDARAFKNVLTKENFQTSETLMVGDLIEHDIKPAQELGMKTAYIGPEKETIADYEFTNIQDFFDSFIEKNGD
Sequences:
>Translated_234_residues MTEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNRFMEKYHEFDELLWPQVHQRKMTIEELREERLSLTI EYFDLKVDENYLTGFFKKFLNRLFELIEPDEQLIQNLKNLSKNYKLALLSNGGHVEQREKLRRSQVEKLFSVYISGETGY LKPDARAFKNVLTKENFQTSETLMVGDLIEHDIKPAQELGMKTAYIGPEKETIADYEFTNIQDFFDSFIEKNGD >Mature_233_residues TEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNRFMEKYHEFDELLWPQVHQRKMTIEELREERLSLTIE YFDLKVDENYLTGFFKKFLNRLFELIEPDEQLIQNLKNLSKNYKLALLSNGGHVEQREKLRRSQVEKLFSVYISGETGYL KPDARAFKNVLTKENFQTSETLMVGDLIEHDIKPAQELGMKTAYIGPEKETIADYEFTNIQDFFDSFIEKNGD
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]
Homologues:
Organism=Escherichia coli, GI1790833, Length=202, Percent_Identity=26.7326732673267, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR011951 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 27978; Mature: 27847
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNRFMEKYHEFDELLWPQ CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VHQRKMTIEELREERLSLTIEYFDLKVDENYLTGFFKKFLNRLFELIEPDEQLIQNLKNL HHHHHHHHHHHHHHHHHEEHHHEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SKNYKLALLSNGGHVEQREKLRRSQVEKLFSVYISGETGYLKPDARAFKNVLTKENFQTS CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCH ETLMVGDLIEHDIKPAQELGMKTAYIGPEKETIADYEFTNIQDFFDSFIEKNGD HHHHHHHHHHHCCCCHHHHCCCCEECCCCHHHHCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNRFMEKYHEFDELLWPQ CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VHQRKMTIEELREERLSLTIEYFDLKVDENYLTGFFKKFLNRLFELIEPDEQLIQNLKNL HHHHHHHHHHHHHHHHHEEHHHEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SKNYKLALLSNGGHVEQREKLRRSQVEKLFSVYISGETGYLKPDARAFKNVLTKENFQTS CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCH ETLMVGDLIEHDIKPAQELGMKTAYIGPEKETIADYEFTNIQDFFDSFIEKNGD HHHHHHHHHHHCCCCHHHHCCCCEECCCCHHHHCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]