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The map label for this gene is yshC

Identifier: 15673794

GI number: 15673794

Start: 1879309

End: 1880253

Strand: Reverse

Name: yshC

Synonym: L62663

Alternate gene names: 15673794

Gene position: 1880253-1879309 (Counterclockwise)

Preceding gene: 15673795

Following gene: 15673793

Centisome position: 79.48

GC content: 36.72

Gene sequence:

>945_bases
ATGTCTGATAAAATACTTGTTTTTGGTCATCAAAAACCTGATACTGACGCTATCGGCTCATCATATGGATTTTCATATTT
GAGCAACCACCGTCCAAATGGTGCCCTTAACACTGAAGTAGTTGCCCTTGGAACTCCAAATGAAGAAACACAATTCGTAT
TGGACTACTTTGGCGTGAAAGCTCCACGTGTAGTAAAATCAGCAAAAGAAGAGGGTGTGGATACAGTAATTTTGACTGAC
CACAATGAGTTCCAACAATCAATCTCTGATATTGAAGACTTAACAATTTATGGTGTAGTTGACCATCACCGTGTGGCTAA
CTTTAATACAGCAGCTCCTTTGTTTATGACTGTTGAACCTGTTGGTTCTGCGTCATCAATTGTTTACCGTAAATTCCTTG
AAGCAAATGTTGAAATCCCTAAAGAAGTTGCTGGACTTTTACTTTCAGGTTTGATTTCAGATACTTTGCTTTTGAAATCT
CCAACGACTCATGTAACAGACCATAAAGTTGCTAAAGAACTTGCTGAAATTGCTGGTGTTAACCTTGAAGAATATGGACT
TGCAATGCTCAAAGCTGGAACAAATTTATCTACTAAAACAGCAGAAGAATTGATTGATATTGATGCAAAAACTTTTGAAT
TGAATGGTTCAAATGTTCGTATTGCACAAGTTAATACAGTTGATATTCCAGAAGTTTTAGAACGTCTTTCAGATATTAAA
GCAGCTATTAATGCTTCAATGACAGCAAATGGATACGATGACTTTGTCTTTATGATTACTGACATTGTTAACTCAAACTC
TGAAATCATTGCTTTGGGTGCACATCCAGAAAAATCAGAAGCAGCTTTCAACTTTACACTTGCAGATGACCACGCCTTCC
TTGCTGGTGCTGTTTCACGTAAAAAACAAGTTGTTCCACAATTGACTGAAAGCTTCAATAAATAA

Upstream 100 bases:

>100_bases
CCATTTTTTGGTATAATTTAAGGGATGATAGCCCAAATAATTTTTAGTTAAAACTAGAAGTTTAAGTGGGAAATTAAAAT
TTTTAAAATGAGGTAAAAAA

Downstream 100 bases:

>100_bases
TGACTATTAAAATCTATAATGAAAATCGGCTGACAAGTCAGCCCTTTTTTAAAGATTTGATAGAATATTTAGCACAACAT
GATGAAGTCATGCTCAGACA

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSDKILVFGHQKPDTDAIGSSYGFSYLSNHRPNGALNTEVVALGTPNEETQFVLDYFGVKAPRVVKSAKEEGVDTVILTD
HNEFQQSISDIEDLTIYGVVDHHRVANFNTAAPLFMTVEPVGSASSIVYRKFLEANVEIPKEVAGLLLSGLISDTLLLKS
PTTHVTDHKVAKELAEIAGVNLEEYGLAMLKAGTNLSTKTAEELIDIDAKTFELNGSNVRIAQVNTVDIPEVLERLSDIK
AAINASMTANGYDDFVFMITDIVNSNSEIIALGAHPEKSEAAFNFTLADDHAFLAGAVSRKKQVVPQLTESFNK

Sequences:

>Translated_314_residues
MSDKILVFGHQKPDTDAIGSSYGFSYLSNHRPNGALNTEVVALGTPNEETQFVLDYFGVKAPRVVKSAKEEGVDTVILTD
HNEFQQSISDIEDLTIYGVVDHHRVANFNTAAPLFMTVEPVGSASSIVYRKFLEANVEIPKEVAGLLLSGLISDTLLLKS
PTTHVTDHKVAKELAEIAGVNLEEYGLAMLKAGTNLSTKTAEELIDIDAKTFELNGSNVRIAQVNTVDIPEVLERLSDIK
AAINASMTANGYDDFVFMITDIVNSNSEIIALGAHPEKSEAAFNFTLADDHAFLAGAVSRKKQVVPQLTESFNK
>Mature_313_residues
SDKILVFGHQKPDTDAIGSSYGFSYLSNHRPNGALNTEVVALGTPNEETQFVLDYFGVKAPRVVKSAKEEGVDTVILTDH
NEFQQSISDIEDLTIYGVVDHHRVANFNTAAPLFMTVEPVGSASSIVYRKFLEANVEIPKEVAGLLLSGLISDTLLLKSP
TTHVTDHKVAKELAEIAGVNLEEYGLAMLKAGTNLSTKTAEELIDIDAKTFELNGSNVRIAQVNTVDIPEVLERLSDIKA
AINASMTANGYDDFVFMITDIVNSNSEIIALGAHPEKSEAAFNFTLADDHAFLAGAVSRKKQVVPQLTESFNK

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PPase class C family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PPAC_LACLA (Q9CEM5)

Other databases:

- EMBL:   AE005176
- PIR:   D86851
- RefSeq:   NP_267969.1
- ProteinModelPortal:   Q9CEM5
- SMR:   Q9CEM5
- GeneID:   1115477
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L62663
- NMPDR:   fig|272623.1.peg.1858
- HOGENOM:   HBG541293
- OMA:   CTTADIK
- ProtClustDB:   PRK05427
- BioCyc:   LLAC272623:L62663-MONOMER
- BRENDA:   3.6.1.1
- GO:   GO:0005737
- HAMAP:   MF_00207
- InterPro:   IPR004097
- InterPro:   IPR022934
- InterPro:   IPR001667

Pfam domain/function: PF01368 DHH; PF02833 DHHA2

EC number: =3.6.1.1

Molecular weight: Translated: 34070; Mature: 33939

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKILVFGHQKPDTDAIGSSYGFSYLSNHRPNGALNTEVVALGTPNEETQFVLDYFGVK
CCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCC
APRVVKSAKEEGVDTVILTDHNEFQQSISDIEDLTIYGVVDHHRVANFNTAAPLFMTVEP
CHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEEEEEEECCCEECCCCCCCCEEEEEEC
VGSASSIVYRKFLEANVEIPKEVAGLLLSGLISDTLLLKSPTTHVTDHKVAKELAEIAGV
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCC
NLEEYGLAMLKAGTNLSTKTAEELIDIDAKTFELNGSNVRIAQVNTVDIPEVLERLSDIK
CHHHHCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHH
AAINASMTANGYDDFVFMITDIVNSNSEIIALGAHPEKSEAAFNFTLADDHAFLAGAVSR
HHHCCCEECCCCCCHHEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHH
KKQVVPQLTESFNK
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SDKILVFGHQKPDTDAIGSSYGFSYLSNHRPNGALNTEVVALGTPNEETQFVLDYFGVK
CCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCC
APRVVKSAKEEGVDTVILTDHNEFQQSISDIEDLTIYGVVDHHRVANFNTAAPLFMTVEP
CHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEEEEEEECCCEECCCCCCCCEEEEEEC
VGSASSIVYRKFLEANVEIPKEVAGLLLSGLISDTLLLKSPTTHVTDHKVAKELAEIAGV
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCC
NLEEYGLAMLKAGTNLSTKTAEELIDIDAKTFELNGSNVRIAQVNTVDIPEVLERLSDIK
CHHHHCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHH
AAINASMTANGYDDFVFMITDIVNSNSEIIALGAHPEKSEAAFNFTLADDHAFLAGAVSR
HHHCCCEECCCCCCHHEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHH
KKQVVPQLTESFNK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471