Click here to switch to the map view.

The map label for this gene is yshB

Identifier: 15673793

GI number: 15673793

Start: 1878512

End: 1879309

Strand: Reverse

Name: yshB

Synonym: L61866

Alternate gene names: NA

Gene position: 1879309-1878512 (Counterclockwise)

Preceding gene: 15673794

Following gene: 15673792

Centisome position: 79.44

GC content: 32.46

Gene sequence:

>798_bases
ATGACTATTAAAATCTATAATGAAAATCGGCTGACAAGTCAGCCCTTTTTTAAAGATTTGATAGAATATTTAGCACAACA
TGATGAAGTCATGCTCAGACAGATTCATAAAGATTTTGCTGACGTAAAAAATATTGACCGGCAAATTGACTCATTTATTG
CTGCTGGGTTAATCTTACGTTCTGATAAACGTTATTCGCTGGGCTTTCATGTTTTTAATGACAGTGAGTTTGATTGGGAA
ACTTTAAAAGATAAAATTGCTGAACCACAGAAAAACATCTACGAATCTCCAATTTTTATTGAAAAGGAGTCACGGATTGA
AAGGCTATTATCCCAAAGTATACTTTATCAATCTTTGACTAATCAAACGAATCAAGTTATCTTGAATTTCATGACATCTT
TTTCTTACAAAGAATATCCACAGAATACTGGAATTCCACAATCACTTGCCAATTATTTTGATAAAGTGGCCAAAAATTTA
CCTTTAACTCCGCTTGAAACAGAGGTTTATCAAATGATTGGCGATGTTGACCCAGAATATGCACTTAAGTATATGACTAC
TTTTCTTTTGAAATTTATGCGTAAAGAAGTTGTCAAATCTAAGTCGGATATTTTTGTCAATGTGCTGGAGAAATACAAGT
ATATTGAAAAAATTTCGGAAAAAGAATACAAATGTCTTTTGAAATTTTCAGAACAAGTGATTCCAGAGCAGAAATATGCT
GATGCTAAATCTTTCATTATTGCTCAAATTCAACAAACCACAGCTATTGAGCCGTTCATCTCACTTGGAGACAAATAG

Upstream 100 bases:

>100_bases
CTTTCAACTTTACACTTGCAGATGACCACGCCTTCCTTGCTGGTGCTGTTTCACGTAAAAAACAAGTTGTTCCACAATTG
ACTGAAAGCTTCAATAAATA

Downstream 100 bases:

>100_bases
GCTATTAGAATAAATTTAAGGAGAACAAATGAAGTACGAAAAACTGTTACCACGTTTTCTTGAATATGTTAAAGTAAATA
CACGTTCAGATGAAAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTIKIYNENRLTSQPFFKDLIEYLAQHDEVMLRQIHKDFADVKNIDRQIDSFIAAGLILRSDKRYSLGFHVFNDSEFDWE
TLKDKIAEPQKNIYESPIFIEKESRIERLLSQSILYQSLTNQTNQVILNFMTSFSYKEYPQNTGIPQSLANYFDKVAKNL
PLTPLETEVYQMIGDVDPEYALKYMTTFLLKFMRKEVVKSKSDIFVNVLEKYKYIEKISEKEYKCLLKFSEQVIPEQKYA
DAKSFIIAQIQQTTAIEPFISLGDK

Sequences:

>Translated_265_residues
MTIKIYNENRLTSQPFFKDLIEYLAQHDEVMLRQIHKDFADVKNIDRQIDSFIAAGLILRSDKRYSLGFHVFNDSEFDWE
TLKDKIAEPQKNIYESPIFIEKESRIERLLSQSILYQSLTNQTNQVILNFMTSFSYKEYPQNTGIPQSLANYFDKVAKNL
PLTPLETEVYQMIGDVDPEYALKYMTTFLLKFMRKEVVKSKSDIFVNVLEKYKYIEKISEKEYKCLLKFSEQVIPEQKYA
DAKSFIIAQIQQTTAIEPFISLGDK
>Mature_264_residues
TIKIYNENRLTSQPFFKDLIEYLAQHDEVMLRQIHKDFADVKNIDRQIDSFIAAGLILRSDKRYSLGFHVFNDSEFDWET
LKDKIAEPQKNIYESPIFIEKESRIERLLSQSILYQSLTNQTNQVILNFMTSFSYKEYPQNTGIPQSLANYFDKVAKNLP
LTPLETEVYQMIGDVDPEYALKYMTTFLLKFMRKEVVKSKSDIFVNVLEKYKYIEKISEKEYKCLLKFSEQVIPEQKYAD
AKSFIIAQIQQTTAIEPFISLGDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31193; Mature: 31062

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKIYNENRLTSQPFFKDLIEYLAQHDEVMLRQIHKDFADVKNIDRQIDSFIAAGLILR
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDKRYSLGFHVFNDSEFDWETLKDKIAEPQKNIYESPIFIEKESRIERLLSQSILYQSLT
CCCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
NQTNQVILNFMTSFSYKEYPQNTGIPQSLANYFDKVAKNLPLTPLETEVYQMIGDVDPEY
HHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH
ALKYMTTFLLKFMRKEVVKSKSDIFVNVLEKYKYIEKISEKEYKCLLKFSEQVIPEQKYA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DAKSFIIAQIQQTTAIEPFISLGDK
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIKIYNENRLTSQPFFKDLIEYLAQHDEVMLRQIHKDFADVKNIDRQIDSFIAAGLILR
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDKRYSLGFHVFNDSEFDWETLKDKIAEPQKNIYESPIFIEKESRIERLLSQSILYQSLT
CCCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
NQTNQVILNFMTSFSYKEYPQNTGIPQSLANYFDKVAKNLPLTPLETEVYQMIGDVDPEY
HHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH
ALKYMTTFLLKFMRKEVVKSKSDIFVNVLEKYKYIEKISEKEYKCLLKFSEQVIPEQKYA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DAKSFIIAQIQQTTAIEPFISLGDK
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA