Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yseH

Identifier: 15673772

GI number: 15673772

Start: 1848357

End: 1848839

Strand: Reverse

Name: yseH

Synonym: L31711

Alternate gene names: NA

Gene position: 1848839-1848357 (Counterclockwise)

Preceding gene: 15673773

Following gene: 30024055

Centisome position: 78.16

GC content: 38.72

Gene sequence:

>483_bases
ATGCTTAATTGGGTCGCCTCCCTCCCACTTTGGTTGGCAACCACATTTTTATTTGTTGTTGTTTTCTTTAGAGCTCAATG
TACTTTTTGGTTAGGAAAATTGAGTTATCATGGAATTTTGAAAACGAAGTGGGGCAAAAAACTTGAGAAAAATTCAGAGA
CTTCCGCTGGAATTTTAGCCATTCAAAAAATGGGTTGGCCAATTATTCCTCTGTCTTTTTTAACAGTCGGTTTTCAAACT
GCTGTTCAATTTGGCGCTGGCCTAACAAATTGGTCTTGGTATAAATACACATTGGCTGCGATTCCAGGTTACTTAGCTTG
GGGATTTATCTATGCCTCCGGAGGACTAAGCCTATTTCGTTCACTCGTTCAGGGTTCGATTGGCTTACTCATTCTATTTA
TCATCATCATTTTAGCTGTGGTAATTGCAGCAAACCTCGTCCTTCGTTATATTCGTAAAAATGGAATAAAAACGGATGAT
TAG

Upstream 100 bases:

>100_bases
ACTGCTAGAGCAAGCTTTTATCTTTATAATACAAAAGCAGATTGTGATAAATTAGTTGAAGCACTTAAAAAAACAAAGGA
GTTTTTCAACCTTGATTAAT

Downstream 100 bases:

>100_bases
AGAACAAGAATAATCAAAAAGTTACTGACAGAAATTTTATAAGTCATTAAAGAAGGCTGTCAGTAACTTTTAGAATTTAT
TTTTATCAATATTAAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: SUF System FeS Assembly Protein; SNARE Associated Golgi Protein; Integral Membrane Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQT
AVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD

Sequences:

>Translated_160_residues
MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQT
AVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD
>Mature_160_residues
MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQT
AVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17854; Mature: 17854

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH
IQKMGWPIIPLSFLTVGFQTAVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFR
HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH
IQKMGWPIIPLSFLTVGFQTAVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFR
HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA