Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yseH
Identifier: 15673772
GI number: 15673772
Start: 1848357
End: 1848839
Strand: Reverse
Name: yseH
Synonym: L31711
Alternate gene names: NA
Gene position: 1848839-1848357 (Counterclockwise)
Preceding gene: 15673773
Following gene: 30024055
Centisome position: 78.16
GC content: 38.72
Gene sequence:
>483_bases ATGCTTAATTGGGTCGCCTCCCTCCCACTTTGGTTGGCAACCACATTTTTATTTGTTGTTGTTTTCTTTAGAGCTCAATG TACTTTTTGGTTAGGAAAATTGAGTTATCATGGAATTTTGAAAACGAAGTGGGGCAAAAAACTTGAGAAAAATTCAGAGA CTTCCGCTGGAATTTTAGCCATTCAAAAAATGGGTTGGCCAATTATTCCTCTGTCTTTTTTAACAGTCGGTTTTCAAACT GCTGTTCAATTTGGCGCTGGCCTAACAAATTGGTCTTGGTATAAATACACATTGGCTGCGATTCCAGGTTACTTAGCTTG GGGATTTATCTATGCCTCCGGAGGACTAAGCCTATTTCGTTCACTCGTTCAGGGTTCGATTGGCTTACTCATTCTATTTA TCATCATCATTTTAGCTGTGGTAATTGCAGCAAACCTCGTCCTTCGTTATATTCGTAAAAATGGAATAAAAACGGATGAT TAG
Upstream 100 bases:
>100_bases ACTGCTAGAGCAAGCTTTTATCTTTATAATACAAAAGCAGATTGTGATAAATTAGTTGAAGCACTTAAAAAAACAAAGGA GTTTTTCAACCTTGATTAAT
Downstream 100 bases:
>100_bases AGAACAAGAATAATCAAAAAGTTACTGACAGAAATTTTATAAGTCATTAAAGAAGGCTGTCAGTAACTTTTAGAATTTAT TTTTATCAATATTAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: SUF System FeS Assembly Protein; SNARE Associated Golgi Protein; Integral Membrane Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQT AVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD
Sequences:
>Translated_160_residues MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQT AVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD >Mature_160_residues MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQT AVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17854; Mature: 17854
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH IQKMGWPIIPLSFLTVGFQTAVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFR HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH IQKMGWPIIPLSFLTVGFQTAVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFR HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA