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The map label for this gene is nifU

Identifier: 30024055

GI number: 30024055

Start: 1847783

End: 1848241

Strand: Reverse

Name: nifU

Synonym: L31137

Alternate gene names: 30024055

Gene position: 1848241-1847783 (Counterclockwise)

Preceding gene: 15673772

Following gene: 15673770

Centisome position: 78.13

GC content: 40.96

Gene sequence:

>459_bases
GTGGCTTTATCTAAATTAGATAATCTATATCGTGCAGTAATTCTTGACCACTCATCAAATCCACGTCATGCTGGAGAATT
ACAGACAGGATGTATGGTTGACCTCAACAATCCAACCTGTGGTGATGTGATTCGCCTGACTGTTGAATTTGAAAATGATG
TCATTTCAAACATTGCTTTTAGTGGCCATGGCTGCACAATCTCAACAGCTTCAGCTTCAATGATGACCGTTGCTGTTCTT
GGAAAAACAAAAGAAGAAGCAAAAGAGCTGGCAACTATTTTTTCAGCAATGGTGACCGGTGAAACTGACGAACGACAAGA
AAAACTTGGAGATGCTCAGTTTCTTGCAGGGGTTAGTAAATTTCCAGCTCGAGTAAAATGCTCCACTCTGGCTTGGAATG
CCCTAAAAAAAGCCATTGATGTTGGTGAAGCACAAGAAACAGTAATTCATGGCGAATAG

Upstream 100 bases:

>100_bases
AAAAAGTTACTGACAGAAATTTTATAAGTCATTAAAGAAGGCTGTCAGTAACTTTTAGAATTTATTTTTATCAATATTAA
AATAAAGAAAGTGTGAAAAT

Downstream 100 bases:

>100_bases
CTAAAAGTTACTGACAGATTTTTTATCAGCAAATAAAAACTCGTCAGTAAAACTGATGAGCTTGTCAGTAGCGGCTGAAA
AAAGCTTTTTATCAATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MALSKLDNLYRAVILDHSSNPRHAGELQTGCMVDLNNPTCGDVIRLTVEFENDVISNIAFSGHGCTISTASASMMTVAVL
GKTKEEAKELATIFSAMVTGETDERQEKLGDAQFLAGVSKFPARVKCSTLAWNALKKAIDVGEAQETVIHGE

Sequences:

>Translated_152_residues
MALSKLDNLYRAVILDHSSNPRHAGELQTGCMVDLNNPTCGDVIRLTVEFENDVISNIAFSGHGCTISTASASMMTVAVL
GKTKEEAKELATIFSAMVTGETDERQEKLGDAQFLAGVSKFPARVKCSTLAWNALKKAIDVGEAQETVIHGE
>Mature_151_residues
ALSKLDNLYRAVILDHSSNPRHAGELQTGCMVDLNNPTCGDVIRLTVEFENDVISNIAFSGHGCTISTASASMMTVAVLG
KTKEEAKELATIFSAMVTGETDERQEKLGDAQFLAGVSKFPARVKCSTLAWNALKKAIDVGEAQETVIHGE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16301; Mature: 16169

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSKLDNLYRAVILDHSSNPRHAGELQTGCMVDLNNPTCGDVIRLTVEFENDVISNIAF
CCHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCHHHHHHEE
SGHGCTISTASASMMTVAVLGKTKEEAKELATIFSAMVTGETDERQEKLGDAQFLAGVSK
CCCCCEEECCCCHHEEHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHH
FPARVKCSTLAWNALKKAIDVGEAQETVIHGE
CCCEEEHHHHHHHHHHHHHCCCCCHHEEECCC
>Mature Secondary Structure 
ALSKLDNLYRAVILDHSSNPRHAGELQTGCMVDLNNPTCGDVIRLTVEFENDVISNIAF
CHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCHHHHHHEE
SGHGCTISTASASMMTVAVLGKTKEEAKELATIFSAMVTGETDERQEKLGDAQFLAGVSK
CCCCCEEECCCCHHEEHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHH
FPARVKCSTLAWNALKKAIDVGEAQETVIHGE
CCCEEEHHHHHHHHHHHHHCCCCCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]