Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is aroE
Identifier: 15673739
GI number: 15673739
Start: 1814827
End: 1815687
Strand: Reverse
Name: aroE
Synonym: L0061
Alternate gene names: 15673739
Gene position: 1815687-1814827 (Counterclockwise)
Preceding gene: 15673740
Following gene: 15673738
Centisome position: 76.75
GC content: 36.93
Gene sequence:
>861_bases ATGAACATTAACGGCTACACTCGTATGGCTGCTGTTGTAGCAAACCCAATTAAACACAGCTTGTCACCATTTATTCATAA TCTGGCTTTTGATTTAACGAATGAAAATGGTGTTTATTTAGCATGGGAAGTTGAGGCTGAAAAATTGCCAGCTATTGTGG ATAATGTTCGTACTTTGGACATGTATGGACTTAATATTTCAATGCCTTATAAAACAGAAATTACTCCATTTATGGATGAA TTGAGTCCGGCAGCTGAATTAATTGGAGCTGTTAATACAGTAGTCAATCAATCAGGGAAATTAATTGGACACAATACAGA TGGCATAGGATTTTTCAATAGTTTAGAAAAATATCATTTCAATATCCAAAATAAACAAATGCTTATTCTTGGTGGAGGGG GTGCAGCAATTGCAATTATTGCTCAGGCAGCTTTGTCTGGAGCTAAAAAAATTGTGGTCGCAGCAAGAAAATCGGCCTCA TATATTCCGCTAAAAGAAAAATTGGAAAAGCTGTCAGTAAAAACAGGGATTGAAATTTTACTGACAGACTTATCTGAAGC TGATAGATTACAAAAAGAGTTGAAACAGACCGACTTATTAGTAAATGCAACCTCAGTCGGAATGGACGGAGAATCTTTGC CGCTGGAAAAGAGCTTAGTTCTTCCTGAAAAACTTTTGGTGGTAGATGCTATTTATAAAGTTAGAGAAACACCATTTTTA CGTTGGGCAAAAGGGCAAGGAGCTCAAACTGAAAATGGACTTGGCATGCTCATTGGACAGGCGGCGGAAAGCTTTTATTT ATGGACAGGTAAAAAAATGCCTGTTGCAGAAATTACATTAGAAATGGAGAAAGAAGCATGA
Upstream 100 bases:
>100_bases ATAGAATTTACTGACAAAGACACTAGCATAGTTGAGCCTTTTGCGTCTTGCGCAATTATGGATATATTAGTAGTTTCATC AGTAATTTTGGAGGATTTTT
Downstream 100 bases:
>100_bases AATTAAATGTGAATTTACCAGAACATCCCTATGATGTCATCATCGAAAATGGGGCCTTGGCTAATATTGGAACTTGGGTT TCTTCATTGTGGAAGAAGCA
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDMYGLNISMPYKTEITPFMDE LSPAAELIGAVNTVVNQSGKLIGHNTDGIGFFNSLEKYHFNIQNKQMLILGGGGAAIAIIAQAALSGAKKIVVAARKSAS YIPLKEKLEKLSVKTGIEILLTDLSEADRLQKELKQTDLLVNATSVGMDGESLPLEKSLVLPEKLLVVDAIYKVRETPFL RWAKGQGAQTENGLGMLIGQAAESFYLWTGKKMPVAEITLEMEKEA
Sequences:
>Translated_286_residues MNINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDMYGLNISMPYKTEITPFMDE LSPAAELIGAVNTVVNQSGKLIGHNTDGIGFFNSLEKYHFNIQNKQMLILGGGGAAIAIIAQAALSGAKKIVVAARKSAS YIPLKEKLEKLSVKTGIEILLTDLSEADRLQKELKQTDLLVNATSVGMDGESLPLEKSLVLPEKLLVVDAIYKVRETPFL RWAKGQGAQTENGLGMLIGQAAESFYLWTGKKMPVAEITLEMEKEA >Mature_286_residues MNINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDMYGLNISMPYKTEITPFMDE LSPAAELIGAVNTVVNQSGKLIGHNTDGIGFFNSLEKYHFNIQNKQMLILGGGGAAIAIIAQAALSGAKKIVVAARKSAS YIPLKEKLEKLSVKTGIEILLTDLSEADRLQKELKQTDLLVNATSVGMDGESLPLEKSLVLPEKLLVVDAIYKVRETPFL RWAKGQGAQTENGLGMLIGQAAESFYLWTGKKMPVAEITLEMEKEA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1787983, Length=278, Percent_Identity=37.0503597122302, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1789675, Length=284, Percent_Identity=33.8028169014084, Blast_Score=135, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6320332, Length=301, Percent_Identity=29.2358803986711, Blast_Score=86, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_LACLA (Q9CES7)
Other databases:
- EMBL: AE005176 - PIR: E86844 - RefSeq: NP_267913.1 - ProteinModelPortal: Q9CES7 - SMR: Q9CES7 - GeneID: 1115420 - GenomeReviews: AE005176_GR - KEGG: lla:L0061 - NMPDR: fig|272623.1.peg.1801 - HOGENOM: HBG553408 - OMA: NARYLAF - ProtClustDB: PRK00258 - BioCyc: LLAC272623:L0061-MONOMER - BRENDA: 1.1.1.25 - GO: GO:0005737 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 31205; Mature: 31205
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: ACT_SITE 71-71
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECHHHCHHHHHCCEEEE MYGLNISMPYKTEITPFMDELSPAAELIGAVNTVVNQSGKLIGHNTDGIGFFNSLEKYHF EECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHEE NIQNKQMLILGGGGAAIAIIAQAALSGAKKIVVAARKSASYIPLKEKLEKLSVKTGIEIL EECCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEE LTDLSEADRLQKELKQTDLLVNATSVGMDGESLPLEKSLVLPEKLLVVDAIYKVRETPFL EECHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE RWAKGQGAQTENGLGMLIGQAAESFYLWTGKKMPVAEITLEMEKEA EEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHEEEEEECCC >Mature Secondary Structure MNINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECHHHCHHHHHCCEEEE MYGLNISMPYKTEITPFMDELSPAAELIGAVNTVVNQSGKLIGHNTDGIGFFNSLEKYHF EECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHEE NIQNKQMLILGGGGAAIAIIAQAALSGAKKIVVAARKSASYIPLKEKLEKLSVKTGIEIL EECCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEE LTDLSEADRLQKELKQTDLLVNATSVGMDGESLPLEKSLVLPEKLLVVDAIYKVRETPFL EECHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE RWAKGQGAQTENGLGMLIGQAAESFYLWTGKKMPVAEITLEMEKEA EEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471