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The map label for this gene is ypjH

Identifier: 15673538

GI number: 15673538

Start: 1598735

End: 1599811

Strand: Reverse

Name: ypjH

Synonym: L198485

Alternate gene names: 15673538

Gene position: 1599811-1598735 (Counterclockwise)

Preceding gene: 15673539

Following gene: 15673537

Centisome position: 67.63

GC content: 37.6

Gene sequence:

>1077_bases
ATGAATATCTCAGAAGAAGTACGTCCCGGAGCCAATAGATATGTGAGTGGTCAAGGAATTTTGCAAGATTTAGAAAGCTA
TCTTGCGTCTTTTAATAAACTTGCGATAATTACTGGGGAAAAATCTTTTCAGGTTTTTCAAGATTTTTATCCTAAAGACT
TAAGTTATCCTGTTTTTCATTATGATGGCTCGGCCTCTATCGAAAATGGGAAAAAACTGGCCAAAGAAATTGGTCAATCC
GATGGCCTTCTTGCAATTGGCGGAGGGCGTTTGATTGATACTTGTAAAGTTGTAGCCCAGGAGCTAAACTGTGAGTTAAT
TATTATTCCGACCTTGGTTTCTAATTGTGCTCCTTACACACCGGTTGCAGCTCTTTATCACCCTGACCATACTTTTGATA
AAGTGGGTTATTTAAATAAAGTGAGCTATTTAACTTTAGTTGATTATGATTTTTTATTGGCAACACCTCATGATTATTTT
GTTGCTGGAATCGGGGATACACTCGCCAAATGGTATGAAATGGAAGGAATCGTTCGTCAGGTTTCACAGGAAGAACTTTC
AGCCTCAGTTCGTTTGGGATTTGCGAGTGCAAAGGAAATTTTTAAAATATTATTTGCTGATTCTAAAGCAGCACTTAATG
ATTTGGCTGAACAGAAAGTGACGCCAGCTTTTGGGCGAATTGTTGATACAATCATTGAACTTTCAGGAACAGTTGGAGGT
TTTGCTGGGACTTATGGACGGATGTCAGGAGCTCATGCGCTTCATAATGGTCTATCACTTTGCTCAGAGACACATCCTAT
TTTACATGGCTCAAAAGTCGCTTACGGAGTCTTGGTACAATTGGCTTATACGGGAGATACTTCAGAAATTGAAAAACTTT
TGCCATTTTATAAGGAAAATCATTTACCTGCTTCTCTAGCAGAAATTAATTTACCATTTGATTTAGAAAAATTGCAAGCA
GTAGCAAAATTTGCAGCCAGTCCTGTAGAATCTTATCGTTTGATTGATTCAAAAGTTACTGACGAAAAAATCATAAGTGC
CATCAAAGCCTTAGAAGCTCTTGTCAGCAAAAAATAA

Upstream 100 bases:

>100_bases
TTGGATTTTACAAAAAAACAACATTTATTCAGTTAAATGTTGTTTTTTTGAATCTTAAGTGATAGAATATTCTAATAATT
ACTTAATTAGGAGGAAAATT

Downstream 100 bases:

>100_bases
GGTTTGACATTCTATCATTGAATCTAAAAGTTACTGACAGAAATTTTGAAAAATAGAATCAAAGTTTCAAGGTCAAAAAT
GAAATAAGGAAAAAGGAATG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNISEEVRPGANRYVSGQGILQDLESYLASFNKLAIITGEKSFQVFQDFYPKDLSYPVFHYDGSASIENGKKLAKEIGQS
DGLLAIGGGRLIDTCKVVAQELNCELIIIPTLVSNCAPYTPVAALYHPDHTFDKVGYLNKVSYLTLVDYDFLLATPHDYF
VAGIGDTLAKWYEMEGIVRQVSQEELSASVRLGFASAKEIFKILFADSKAALNDLAEQKVTPAFGRIVDTIIELSGTVGG
FAGTYGRMSGAHALHNGLSLCSETHPILHGSKVAYGVLVQLAYTGDTSEIEKLLPFYKENHLPASLAEINLPFDLEKLQA
VAKFAASPVESYRLIDSKVTDEKIISAIKALEALVSKK

Sequences:

>Translated_358_residues
MNISEEVRPGANRYVSGQGILQDLESYLASFNKLAIITGEKSFQVFQDFYPKDLSYPVFHYDGSASIENGKKLAKEIGQS
DGLLAIGGGRLIDTCKVVAQELNCELIIIPTLVSNCAPYTPVAALYHPDHTFDKVGYLNKVSYLTLVDYDFLLATPHDYF
VAGIGDTLAKWYEMEGIVRQVSQEELSASVRLGFASAKEIFKILFADSKAALNDLAEQKVTPAFGRIVDTIIELSGTVGG
FAGTYGRMSGAHALHNGLSLCSETHPILHGSKVAYGVLVQLAYTGDTSEIEKLLPFYKENHLPASLAEINLPFDLEKLQA
VAKFAASPVESYRLIDSKVTDEKIISAIKALEALVSKK
>Mature_358_residues
MNISEEVRPGANRYVSGQGILQDLESYLASFNKLAIITGEKSFQVFQDFYPKDLSYPVFHYDGSASIENGKKLAKEIGQS
DGLLAIGGGRLIDTCKVVAQELNCELIIIPTLVSNCAPYTPVAALYHPDHTFDKVGYLNKVSYLTLVDYDFLLATPHDYF
VAGIGDTLAKWYEMEGIVRQVSQEELSASVRLGFASAKEIFKILFADSKAALNDLAEQKVTPAFGRIVDTIIELSGTVGG
FAGTYGRMSGAHALHNGLSLCSETHPILHGSKVAYGVLVQLAYTGDTSEIEKLLPFYKENHLPASLAEINLPFDLEKLQA
VAKFAASPVESYRLIDSKVTDEKIISAIKALEALVSKK

Specific function: Unknown

COG id: COG0371

COG function: function code C; Glycerol dehydrogenase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786815, Length=352, Percent_Identity=32.3863636363636, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI87082352, Length=351, Percent_Identity=27.3504273504274, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211
- InterPro:   IPR016205 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 39040; Mature: 39040

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00913 ADH_IRON_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISEEVRPGANRYVSGQGILQDLESYLASFNKLAIITGEKSFQVFQDFYPKDLSYPVFH
CCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCEEE
YDGSASIENGKKLAKEIGQSDGLLAIGGGRLIDTCKVVAQELNCELIIIPTLVSNCAPYT
ECCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEECCHHHHCCCCCC
PVAALYHPDHTFDKVGYLNKVSYLTLVDYDFLLATPHDYFVAGIGDTLAKWYEMEGIVRQ
CEEEEECCCCCHHHHHHHHHHHEEEEECCHHEEECCCHHEEECHHHHHHHHHHHHHHHHH
VSQEELSASVRLGFASAKEIFKILFADSKAALNDLAEQKVTPAFGRIVDTIIELSGTVGG
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
FAGTYGRMSGAHALHNGLSLCSETHPILHGSKVAYGVLVQLAYTGDTSEIEKLLPFYKEN
CHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHEEEHEEEEECCCHHHHHHHHHHHHCC
HLPASLAEINLPFDLEKLQAVAKFAASPVESYRLIDSKVTDEKIISAIKALEALVSKK
CCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNISEEVRPGANRYVSGQGILQDLESYLASFNKLAIITGEKSFQVFQDFYPKDLSYPVFH
CCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCEEE
YDGSASIENGKKLAKEIGQSDGLLAIGGGRLIDTCKVVAQELNCELIIIPTLVSNCAPYT
ECCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEECCHHHHCCCCCC
PVAALYHPDHTFDKVGYLNKVSYLTLVDYDFLLATPHDYFVAGIGDTLAKWYEMEGIVRQ
CEEEEECCCCCHHHHHHHHHHHEEEEECCHHEEECCCHHEEECHHHHHHHHHHHHHHHHH
VSQEELSASVRLGFASAKEIFKILFADSKAALNDLAEQKVTPAFGRIVDTIIELSGTVGG
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
FAGTYGRMSGAHALHNGLSLCSETHPILHGSKVAYGVLVQLAYTGDTSEIEKLLPFYKEN
CHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHEEEHEEEEECCCHHHHHHHHHHHHCC
HLPASLAEINLPFDLEKLQAVAKFAASPVESYRLIDSKVTDEKIISAIKALEALVSKK
CCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 1848300; 7567469 [H]