Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ypjI
Identifier: 15673539
GI number: 15673539
Start: 1599914
End: 1600459
Strand: Reverse
Name: ypjI
Synonym: L199664
Alternate gene names: NA
Gene position: 1600459-1599914 (Counterclockwise)
Preceding gene: 15673540
Following gene: 15673538
Centisome position: 67.66
GC content: 37.36
Gene sequence:
>546_bases ATGAATTCTAGAAAAAGTAAAAAAGTGAGAAAAGGCCGAGGAGGTAAAATTTTTGCGATTTTATTATCCATTGTTATATT TTTTGCTTTAATTATTTTTGGAGTAGTCATGATTGGTCGGCAAGTCATTTCAAGTCAAACGGATAATATTGCTGCTAAAT TTTTACCAAGCTCAGGAAGTTCAGGAAGCTCAGAAGGCTCAGCTAGTGTGACTGATGCAGTGAGTCAAATGGGATCGGCA ACACCATCAGCTATTGCCACAAAATTAAATGAAAATGCAGATGTAATTAAGAGTCAATCGCAAGGAATGATAAGTTCAGC AAAAGCAACGAGCACTAGCTCTAAAGTGACTTACACCTTGGAATCCTCTAAACTCAATAAAGCAACCGTTGGCGCCCTTT TATTAGCAAGTGGTGACCAAGTTGAAGAAGTAGCGGATAAGGTGTTAGATTCAATGAAAAAAGCTGGGGTTGCTCAACCT AAATTGCAAGTTGATTTGACTGATGATAAGGGGAATGTCATCAAAACGTTGAATTATAGTGCTTAA
Upstream 100 bases:
>100_bases AATTGTAAAAAAGTAGTTGAAAAGCTACTTTTTTTAGTTTTCTTTAAAGTACAAAATGGTATAATACTAAATAAGTCTCA AAAATAGAAAAGGGAAAGAA
Downstream 100 bases:
>100_bases AATTGGATTTTACAAAAAAACAACATTTATTCAGTTAAATGTTGTTTTTTTGAATCTTAAGTGATAGAATATTCTAATAA TTACTTAATTAGGAGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNSRKSKKVRKGRGGKIFAILLSIVIFFALIIFGVVMIGRQVISSQTDNIAAKFLPSSGSSGSSEGSASVTDAVSQMGSA TPSAIATKLNENADVIKSQSQGMISSAKATSTSSKVTYTLESSKLNKATVGALLLASGDQVEEVADKVLDSMKKAGVAQP KLQVDLTDDKGNVIKTLNYSA
Sequences:
>Translated_181_residues MNSRKSKKVRKGRGGKIFAILLSIVIFFALIIFGVVMIGRQVISSQTDNIAAKFLPSSGSSGSSEGSASVTDAVSQMGSA TPSAIATKLNENADVIKSQSQGMISSAKATSTSSKVTYTLESSKLNKATVGALLLASGDQVEEVADKVLDSMKKAGVAQP KLQVDLTDDKGNVIKTLNYSA >Mature_181_residues MNSRKSKKVRKGRGGKIFAILLSIVIFFALIIFGVVMIGRQVISSQTDNIAAKFLPSSGSSGSSEGSASVTDAVSQMGSA TPSAIATKLNENADVIKSQSQGMISSAKATSTSSKVTYTLESSKLNKATVGALLLASGDQVEEVADKVLDSMKKAGVAQP KLQVDLTDDKGNVIKTLNYSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18806; Mature: 18806
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRKSKKVRKGRGGKIFAILLSIVIFFALIIFGVVMIGRQVISSQTDNIAAKFLPSSGS CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCC SGSSEGSASVTDAVSQMGSATPSAIATKLNENADVIKSQSQGMISSAKATSTSSKVTYTL CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHCCCCCCCEEEEEE ESSKLNKATVGALLLASGDQVEEVADKVLDSMKKAGVAQPKLQVDLTDDKGNVIKTLNYS CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCC A C >Mature Secondary Structure MNSRKSKKVRKGRGGKIFAILLSIVIFFALIIFGVVMIGRQVISSQTDNIAAKFLPSSGS CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCC SGSSEGSASVTDAVSQMGSATPSAIATKLNENADVIKSQSQGMISSAKATSTSSKVTYTL CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHCCCCCCCEEEEEE ESSKLNKATVGALLLASGDQVEEVADKVLDSMKKAGVAQPKLQVDLTDDKGNVIKTLNYS CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA