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The map label for this gene is scpA

Identifier: 15673259

GI number: 15673259

Start: 1309244

End: 1309972

Strand: Reverse

Name: scpA

Synonym: L108989

Alternate gene names: 15673259

Gene position: 1309972-1309244 (Counterclockwise)

Preceding gene: 30024035

Following gene: 30024034

Centisome position: 55.38

GC content: 29.63

Gene sequence:

>729_bases
ATGATTAAAGAAATCAATATAAAAATTAAAAACTTCGAGGGTCCTCTCGACCTTTTATTGCATTTGGTAAGTCAGTATGA
AATGGATATTTTTGAAGTTCCATTGGTACCAGTTATTGAGCAATATCTTATCTATATTCAAACCATGAAAGAACTTGAAT
TGGAAGTAGCTGGAGAGTACATGTTAATGGCAAGTCAACTGATGTTAATTAAATCAAGAAGACTTTTACCGACAGTTACC
GAAACTTTTATTGAAGATACAGAACAACTTGAGTATGATTTATTGGCTCAAATTGATGAATATCGGAAATATAAAATGTT
GTCACAAGATTTAGATGAACTTCATCAGGAACGTAGTCATTTTTATTCAAAAGCTAAGACAGAAATTATCACTGATGAAA
CTGTACTTTTGCAGGATAAATCTGCTTTAGATTTATTTCTAGCTTTTACTAAAATTCTTGAGTTGCAAAGACAACATTTT
CAAGACGAGAACACAAAAATAGCAGCTGAGAAATTTACAATCGCTGATAAGATTTTAGAGTTAAGTACTAGATTTACAGA
ACAAAAAATATGTAAATTTTCAGATTTATTTTCTAGCTCTACTAATAAAGATGAACTCGTCACCACTTTTATGGCTCTTT
TAGAATTAATCAAAAATCAACAGATTTCTTTTTCTCAAGGAGAGCTTTTTGGAGAAATTATTTTAGAAAGAAAAGAAACT
AGTGAATAA

Upstream 100 bases:

>100_bases
AGTCAATTTATGAACTGGCAACTCTACTTGGTTTAACAACTATTACAACGCTTGAAAAATATTATAGATAGGAATTTACA
CTATTTTTATTATGTAAACT

Downstream 100 bases:

>100_bases
GACAGCAAGTTGTGAACTCTTACTTTTTGTATCTGGCGAAGCTGGTTTAACTTTGGCAGAATTGTCAGCATTGACAGAAA
TGTCTAAACAAGCTTGTCAG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELEVAGEYMLMASQLMLIKSRRLLPTVT
ETFIEDTEQLEYDLLAQIDEYRKYKMLSQDLDELHQERSHFYSKAKTEIITDETVLLQDKSALDLFLAFTKILELQRQHF
QDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSSTNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET
SE

Sequences:

>Translated_242_residues
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELEVAGEYMLMASQLMLIKSRRLLPTVT
ETFIEDTEQLEYDLLAQIDEYRKYKMLSQDLDELHQERSHFYSKAKTEIITDETVLLQDKSALDLFLAFTKILELQRQHF
QDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSSTNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET
SE
>Mature_242_residues
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELEVAGEYMLMASQLMLIKSRRLLPTVT
ETFIEDTEQLEYDLLAQIDEYRKYKMLSQDLDELHQERSHFYSKAKTEIITDETVLLQDKSALDLFLAFTKILELQRQHF
QDENTKIAAEKFTIADKILELSTRFTEQKICKFSDLFSSSTNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET
SE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_LACLA (Q9CG33)

Other databases:

- EMBL:   AE005176
- PIR:   E86784
- RefSeq:   NP_267433.1
- GeneID:   1114926
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L108989
- NMPDR:   fig|272623.1.peg.1312
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- ProtClustDB:   PRK00104
- BioCyc:   LLAC272623:L108989-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR023093
- InterPro:   IPR003768
- Gene3D:   G3DSA:1.10.10.580

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 28428; Mature: 28428

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELEVAGEY
CCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLMASQLMLIKSRRLLPTVTETFIEDTEQLEYDLLAQIDEYRKYKMLSQDLDELHQERSH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYSKAKTEIITDETVLLQDKSALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILE
HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH
LSTRFTEQKICKFSDLFSSSTNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
SE
CC
>Mature Secondary Structure
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELEVAGEY
CCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLMASQLMLIKSRRLLPTVTETFIEDTEQLEYDLLAQIDEYRKYKMLSQDLDELHQERSH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYSKAKTEIITDETVLLQDKSALDLFLAFTKILELQRQHFQDENTKIAAEKFTIADKILE
HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH
LSTRFTEQKICKFSDLFSSSTNKDELVTTFMALLELIKNQQISFSQGELFGEIILERKET
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
SE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471