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The map label for this gene is ygfC

Identifier: 15672643

GI number: 15672643

Start: 653769

End: 654338

Strand: Reverse

Name: ygfC

Synonym: L53789

Alternate gene names: NA

Gene position: 654338-653769 (Counterclockwise)

Preceding gene: 15672644

Following gene: 15672642

Centisome position: 27.66

GC content: 30.35

Gene sequence:

>570_bases
ATGCCTAAATCAACCTATTTCAGTCTATCTGACGAAAAACGCAATCGCGTATATGATGCCTGTTTAAATGAATTTCAGAC
TCATTCTTTTCACGAGGCAAAAATTATGCACATCGTAAAAGCTCTTGATATTCCGAGAGGGAGTTTTTATCAGTATTTTG
AAGATTTAAAAGATGCTTATTTCTATGTCCTCTCGCAAGAAACCCTTGAAATCCATGATTTATTTTTTAATTTATTAAAA
GATAATTCCATTGAAGAGTCTCTAGATAAATACAAATATCTCCTTCTTGAAAATTTAATTGATTCTCCCCAATACAAACT
TTATAAATATCGCTTTTTAGATTGGACTTATGAACTTGAAAGAGATTGGAAACCCCAAAGTTCAGCAACCGTCCCAGCTA
GTGAAAATGATAATCCAATTTCACAAGTATTAAAATCAGTTGTTCATAATCTCGTTTATAGATTATTCAGTGAAAATTGG
ACTGAGAAAACTTTTATTGAAAATTATGATAAAGAAATCAAATTAGTCACCGAAGGTTTACTTAATTATATTACTGACAG
AAAAAACTGA

Upstream 100 bases:

>100_bases
TTTTTGCTTAAAAAAAAATTAAATAATTGATGTTAATCAATTAATTTGTTAGAATTTAATAAATGACACAGTGTCATAAA
TTGAATGAATTGGAGAAAAA

Downstream 100 bases:

>100_bases
AAGGAGATTTTATGTTTTTAGCACTAAGAGAAATACGTTATAATAAAGCTCGTTACACCTTAATCGGAGCTATTATTTTT
TTAATCGCTTATGTAGTCTT

Product: transcription regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPKSTYFSLSDEKRNRVYDACLNEFQTHSFHEAKIMHIVKALDIPRGSFYQYFEDLKDAYFYVLSQETLEIHDLFFNLLK
DNSIEESLDKYKYLLLENLIDSPQYKLYKYRFLDWTYELERDWKPQSSATVPASENDNPISQVLKSVVHNLVYRLFSENW
TEKTFIENYDKEIKLVTEGLLNYITDRKN

Sequences:

>Translated_189_residues
MPKSTYFSLSDEKRNRVYDACLNEFQTHSFHEAKIMHIVKALDIPRGSFYQYFEDLKDAYFYVLSQETLEIHDLFFNLLK
DNSIEESLDKYKYLLLENLIDSPQYKLYKYRFLDWTYELERDWKPQSSATVPASENDNPISQVLKSVVHNLVYRLFSENW
TEKTFIENYDKEIKLVTEGLLNYITDRKN
>Mature_188_residues
PKSTYFSLSDEKRNRVYDACLNEFQTHSFHEAKIMHIVKALDIPRGSFYQYFEDLKDAYFYVLSQETLEIHDLFFNLLKD
NSIEESLDKYKYLLLENLIDSPQYKLYKYRFLDWTYELERDWKPQSSATVPASENDNPISQVLKSVVHNLVYRLFSENWT
EKTFIENYDKEIKLVTEGLLNYITDRKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22749; Mature: 22618

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSTYFSLSDEKRNRVYDACLNEFQTHSFHEAKIMHIVKALDIPRGSFYQYFEDLKDAY
CCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FYVLSQETLEIHDLFFNLLKDNSIEESLDKYKYLLLENLIDSPQYKLYKYRFLDWTYELE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEHHHHHHEECC
RDWKPQSSATVPASENDNPISQVLKSVVHNLVYRLFSENWTEKTFIENYDKEIKLVTEGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LNYITDRKN
HHHHHCCCC
>Mature Secondary Structure 
PKSTYFSLSDEKRNRVYDACLNEFQTHSFHEAKIMHIVKALDIPRGSFYQYFEDLKDAY
CCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FYVLSQETLEIHDLFFNLLKDNSIEESLDKYKYLLLENLIDSPQYKLYKYRFLDWTYELE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEHHHHHHEECC
RDWKPQSSATVPASENDNPISQVLKSVVHNLVYRLFSENWTEKTFIENYDKEIKLVTEGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LNYITDRKN
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA